Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS05656 |
Symbol | RSp1321 |
ID | 1223633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1672441 |
End bp | 1673061 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637241184 |
Product | hypothetical protein |
Protein accession | NP_522880 |
Protein GI | 17549540 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCCTT CCCTCACCTT CCTGTTCGCC GCGACGCTCC TGGCCATCAC CCCGGGGCCG GGCATCGCGT ATGTCGTCGC CCGTACCGTC GCCGGCGGCA AGGCAGAGGG CATCGCGTCC TGCATCGGCA CCGCCGTCGG CGGCACGGTG CACGTCCTGG CGGCGGCGCT CGGCCTGTCC CTGCTCATTG CGCAGTCGGC GCTGGCCTAC TCGATCGTGA AATACCTCGG GGCGGCTTAC CTGATCTACC TCGGCATCAG GATCCTGGCA TCGCGCGCGC AGCCCGCGGC GCTGCCGACG ATCCAGCGGG CCGGCGCACG GAAAGCGTTC AGGGATGGCG TGATCGTCGA AGCGCTCAAC GTCAAGACAG CGATGTTTTT CCTGGCCTTC ATCCCGCAGT TCGTGACGGC CGGACATGGA TTCGCGCTTC AGTTCATCGT GCTCGGCACC ACCTGCGTCG CGCTCAACAC GGCCGTGGAT TTGCTGGCCG TCAGTGCGGC CAGCCGCTTC GTCGCGTCCG GCACCGTCAG GGCCGCCCGG GAACGATTGC TGTCGCGGGT GTCCGGCGTC ACCATGCTGT CGCTCGGGGT CTTGGTTGCC GTGGCCAATC GGGAGCGCTG A
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Protein sequence | MLPSLTFLFA ATLLAITPGP GIAYVVARTV AGGKAEGIAS CIGTAVGGTV HVLAAALGLS LLIAQSALAY SIVKYLGAAY LIYLGIRILA SRAQPAALPT IQRAGARKAF RDGVIVEALN VKTAMFFLAF IPQFVTAGHG FALQFIVLGT TCVALNTAVD LLAVSAASRF VASGTVRAAR ERLLSRVSGV TMLSLGVLVA VANRER
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