Gene RS05656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS05656 
SymbolRSp1321 
ID1223633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1672441 
End bp1673061 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content68% 
IMG OID637241184 
Producthypothetical protein 
Protein accessionNP_522880 
Protein GI17549540 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCCTT CCCTCACCTT CCTGTTCGCC GCGACGCTCC TGGCCATCAC CCCGGGGCCG 
GGCATCGCGT ATGTCGTCGC CCGTACCGTC GCCGGCGGCA AGGCAGAGGG CATCGCGTCC
TGCATCGGCA CCGCCGTCGG CGGCACGGTG CACGTCCTGG CGGCGGCGCT CGGCCTGTCC
CTGCTCATTG CGCAGTCGGC GCTGGCCTAC TCGATCGTGA AATACCTCGG GGCGGCTTAC
CTGATCTACC TCGGCATCAG GATCCTGGCA TCGCGCGCGC AGCCCGCGGC GCTGCCGACG
ATCCAGCGGG CCGGCGCACG GAAAGCGTTC AGGGATGGCG TGATCGTCGA AGCGCTCAAC
GTCAAGACAG CGATGTTTTT CCTGGCCTTC ATCCCGCAGT TCGTGACGGC CGGACATGGA
TTCGCGCTTC AGTTCATCGT GCTCGGCACC ACCTGCGTCG CGCTCAACAC GGCCGTGGAT
TTGCTGGCCG TCAGTGCGGC CAGCCGCTTC GTCGCGTCCG GCACCGTCAG GGCCGCCCGG
GAACGATTGC TGTCGCGGGT GTCCGGCGTC ACCATGCTGT CGCTCGGGGT CTTGGTTGCC
GTGGCCAATC GGGAGCGCTG A
 
Protein sequence
MLPSLTFLFA ATLLAITPGP GIAYVVARTV AGGKAEGIAS CIGTAVGGTV HVLAAALGLS 
LLIAQSALAY SIVKYLGAAY LIYLGIRILA SRAQPAALPT IQRAGARKAF RDGVIVEALN
VKTAMFFLAF IPQFVTAGHG FALQFIVLGT TCVALNTAVD LLAVSAASRF VASGTVRAAR
ERLLSRVSGV TMLSLGVLVA VANRER