Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS05645 |
Symbol | RSp1162 |
ID | 1223474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1461538 |
End bp | 1463076 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637241027 |
Product | two-component sensor histidine kinase transcription regulator protein |
Protein accession | NP_522723 |
Protein GI | 17549383 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTGT CTTTCGGCAT CACCTCCAAG CTGTTCGTCG CGCTGTTCGC GCTGAGCATG GTCGTCGCGC TCGCCATGGG CGCGGCGGTG CGCTGGCGTT TCGACACCAA CTTTCTCGAC TACGTCAACG CTCGCGAAGC CGAGCGCATG GCGGTGTTTG CCCAGAGCAT CGAATCGGTC TATGCCGAGC ATGGGAACTG GGGTGTCCTG CGCAATGACC GGCAGGCCTG GTACCGCCTG ATCCGGCGCG AGATCGGCCG CACGCATGCG GGGCCATTCG GCGGTCCGCG CGGTGATGCA GAGCCTGTGC CGCCCTTCGC TCCGCCGCCG GGGGACGTGC CGCCGCCCGG TCTGCCGCCG CCGCCTCCGG ATGCCGGCGA TCGCCCGCCG CAGCATCCGC CTGGCGAAGG GCCCGGCATG CATCCGCCGA TCTGGCTGCT CGATGCCGGG CGCGTCCCGA TTGTCGGCGA CGGCCCGCCG CCCGGCCCGG GTTCGCAGTG GCATGCGCTG CATCACAACG GCCAGACCGT CGGCTGGCTG GCGACCCCGC AGCGCATGCA CGTGCCCGAG GGGGCCGACC AGGCCTTCCT GGCCCAGCAG CTGCGCGCCA CCTGGATCAT CGCCGCGCTG TCGGTGCTGC TCGCGGCGGG CGTGGCGATC CTGCTCGCGC GCGGCGTGCT GGCGCCGATG CGGCGGCTGG CCCATGCCAC GCGCCGCATG GCCGAGGGCG ACTACGCGGC GCGGGTCGAT GTGCATTCGG GCGACGAGAT CGGCCACCTG GCCGACGATT TCAACCGGCT GGCCGAAACG CTCGAGGCCA ACCAGAAGAT GCGCCGCCAG CTGACGGCCG ACATTTCGCA CGAACTGCGC ACGCCGCTGG CGGTGCTGCG CGGCGAACTG GAGGCGCTCG AGGACGGCGT GCGGGCCCTC ACGCCCGCGT CGCTGACCTC GCTGCAGGCC GAGGTGGGCA CGCTGTCCAA GCTGATCGAC GATCTGTACG AGCTGTCCCT GGCCGATGTG GGCGCGCTGG CTTTCCACAT GGAGTCGATC GACCTGGCCG ATACCGTATG CAGCGCGGCG CAGGGGTTCA CCCCGCGCCT GATGGACAAG CGCATCGCCT TGCAGCTCGA CCTGCCGACG GGGCCGTCGC GCGACGCGGC CATCCAGGGC GATCCGCAGC GCCTGCGCCA GCTGATGCAG AACCTGCTGG AGAACACGCT GCGCTATACC GACGCGGGCG GCACGCTGCG CATCCACGTC CATCGCGCAG GCGCGTGGTG GTGCCTGGAC GTGCAGGACA GCGCGCCGGG CGTGCCGGAG GCGATGCTGC CGCGCGTGTT CGACCGGCTG TTCCGCGCCG ATCCTTCCCG GGGCCGCGCG CAAGGCGGGG CCGGGCTGGG CCTGAGCCTG TGCCAGACTA TCGTGCAGAC GCACGGTGGC ACCATCGACG CCAGACCTTC ACCGCTGGGC GGGCTGTGGA TTGCGATCCG CCTGCCGGCT GCCAACTCCT CTGTTGCTGA CCATGATCCT GATCGTTGA
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Protein sequence | MRLSFGITSK LFVALFALSM VVALAMGAAV RWRFDTNFLD YVNAREAERM AVFAQSIESV YAEHGNWGVL RNDRQAWYRL IRREIGRTHA GPFGGPRGDA EPVPPFAPPP GDVPPPGLPP PPPDAGDRPP QHPPGEGPGM HPPIWLLDAG RVPIVGDGPP PGPGSQWHAL HHNGQTVGWL ATPQRMHVPE GADQAFLAQQ LRATWIIAAL SVLLAAGVAI LLARGVLAPM RRLAHATRRM AEGDYAARVD VHSGDEIGHL ADDFNRLAET LEANQKMRRQ LTADISHELR TPLAVLRGEL EALEDGVRAL TPASLTSLQA EVGTLSKLID DLYELSLADV GALAFHMESI DLADTVCSAA QGFTPRLMDK RIALQLDLPT GPSRDAAIQG DPQRLRQLMQ NLLENTLRYT DAGGTLRIHV HRAGAWWCLD VQDSAPGVPE AMLPRVFDRL FRADPSRGRA QGGAGLGLSL CQTIVQTHGG TIDARPSPLG GLWIAIRLPA ANSSVADHDP DR
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