| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05543 |
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| Symbol | RSp0078 |
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| ID | 1222626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 87313 |
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| End bp | 88512 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637239937 |
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| Product | hypothetical protein |
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| Protein accession | NP_521639 |
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| Protein GI | 17548299 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.331898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCCG CCCCTGCCTC CCCGACGCAA TCCGCCACCA CCGACACCCA GGGGCTGATC
CGCCTGCTGA CGGCCGGTGC CGGCGTCAGC GTCGCCTGCA TCTACCTGAA TCATCCGCTG
CTCGGCCTGA TCGGCCACGA CCTGAACATC GCGCCGCACG CGCTGGGCGT GCTGCCGACC
CTGACGGCGG CCGGCTACGC CAGCGGCATT TTTTTCTTCG GCCCGCTGGG CGACCGCTAC
GACCGCCGCG TGGTGATCCT GTGGAAGGCC GTGCTGCTGA CACTCGCGCT GATCGGCAGC
TGCATCGCGC CCGGCCTGCC GGTGCTGGCC GCCGCCGGTT TCGTCATCGG CCTGGCGGCC
ACCATCGCCC AGGATTTCGT GCCCAGCGCG GCCGCCATCA GCACCGACCT CAACCGCAAT
CGCAACATCG GCACGGTGAT GACTGGGCTG CTGATCGGCA TCGTCGGCTC GCGGGTGTTC
AGCGGCATCG TGGCCGACCA CTTCGGCTGG CGCGCGGCCT TCGGCGTGTC GGCGGCGGCG
ATCGTGGGGC TGGCGCTGGC GGTGCGGGCG GCGCATTTCG GGGTGGCGCC GGCCACGCGG
CAGCCGTATG TCACGCTGCT GCGCTCGCTC GGCACGCTGT TTGCGCGGCA TCCGCGGCTG
CGGGCCTCCG CCTTCACGCA GGCGTTCCTC GCCGTGGCGT TCTCGGGGTT CTGGTCTACC
GTGGCGCTGC ATTTGACCGG CACGATCGGG CTGTCGGCCG GGCAGGCCGG CCTGCTGGGC
CTGGCCGGCG CGGCCGGGGC CCTGGGCGCG AGCATCGCCG GCCGGCTGTC GGGCCGCGTG
GCGCCGGGCC ATATCGTGGC GGGCGGCGCG CTGCTGATGG CCGCGACCTT TGCCGCGATG
GCGCTGTTCC CGCATTCCCT GCCCGCCATC GTGATCGGCA CGCTGCTGTT CGATGTGGGC
GTGCAGGCGG CGCTGGTCTC ACACCAGACC ATCATCTACG CGCTGGCGCC GGAAGCGCGC
AGCCGCATCA ACGCGGTCTT CATGACCATC ATGTTCATCG GCATGTCGGC CGGCGCCTAC
GGCGCAAGCC TGGCGTGGAG CTACGCACAC TGGACCGGGC TGATGGCGTT CTGCACGGCG
GCCTCGTCGA TCGGGCTAGG GCTGCGGCTG GCCTTCAACG CGCGGCTGGG GACACGTTAG
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| Protein sequence | MPAAPASPTQ SATTDTQGLI RLLTAGAGVS VACIYLNHPL LGLIGHDLNI APHALGVLPT
LTAAGYASGI FFFGPLGDRY DRRVVILWKA VLLTLALIGS CIAPGLPVLA AAGFVIGLAA
TIAQDFVPSA AAISTDLNRN RNIGTVMTGL LIGIVGSRVF SGIVADHFGW RAAFGVSAAA
IVGLALAVRA AHFGVAPATR QPYVTLLRSL GTLFARHPRL RASAFTQAFL AVAFSGFWST
VALHLTGTIG LSAGQAGLLG LAGAAGALGA SIAGRLSGRV APGHIVAGGA LLMAATFAAM
ALFPHSLPAI VIGTLLFDVG VQAALVSHQT IIYALAPEAR SRINAVFMTI MFIGMSAGAY
GASLAWSYAH WTGLMAFCTA ASSIGLGLRL AFNARLGTR
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