Gene RS05535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS05535 
SymbolRSp0087 
ID1222490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp97426 
End bp97950 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content51% 
IMG OID637239946 
Producthypothetical protein 
Protein accessionNP_521648 
Protein GI17548308 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.164365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.982947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGACA AGGCTGGTTC ATTCCCGGAT GTGCCGGCTG TCGATAGTGT TAGAGCCCTT 
CGTGTTTGGC ATTGCAAGTA CAAGAGCCTG GTAAAGCTGA GCGCTTTCCA TAACTTGGAG
GAGCTTGTGA TAGCGTCGTT CCCAGACGAC TCGTTCACGG CTCTTGAGGG GGTCGGGAAG
CTTCGATATC TGAGCGTGTT GCATATGCCG AAGATAAAGA GCCTTGCTCC ATTGGCTAAT
TTAGGTGAGC TTGAATCCTT ATCGCTCGCG ACATCGCCAA CATGGGATGC TTCGGGGAAA
TGCACCGTCG TTGAGTCTCT AGAGCCTCTT GTGAGCCTGC ATAAACTGAA GCACTTGGAA
TTGTTTGGTG TACGTCCACA GGATGCTTCT CTTGCTGTGT TGGAAAAGTG CAAGAGCCTA
GAATCTGTGC GGCTCTCTCA GTATCCGAAA GAGGAAGTTG AGAGATTTAT TAGCGCGACC
GGAGTACGGA ACGCGTTCAA CCCGAAACCA TCGCTGATTG GCTAG
 
Protein sequence
MRDKAGSFPD VPAVDSVRAL RVWHCKYKSL VKLSAFHNLE ELVIASFPDD SFTALEGVGK 
LRYLSVLHMP KIKSLAPLAN LGELESLSLA TSPTWDASGK CTVVESLEPL VSLHKLKHLE
LFGVRPQDAS LAVLEKCKSL ESVRLSQYPK EEVERFISAT GVRNAFNPKP SLIG