| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05514 |
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| Symbol | RSp0164 |
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| ID | 1222567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 190739 |
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| End bp | 192187 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637240023 |
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| Product | hypothetical protein |
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| Protein accession | NP_521725 |
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| Protein GI | 17548385 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.957983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGGTG AGCCCGCCGC CCGCCCCGCG CCGGCACGCA TGACGGACGG CCCCATCGCC
GGGACGCTGT TCGCCCTGTT CCTGCCGATC CTGTCCGGCA ACCTGCTGCA GACGCTGGGC
AGCTCGGTCA ACGCGATGTG GGTCGGCCGC ATGCTGGGCG ATACGGCGCT GGCGGCTGCG
GCCAATGGGA ATGCCGTCAT CGCGTTCGTC GTCGCGATGG TGATGGGCAT CGGTACGGCG
GCATCCATCC TGATCGGGCA GAGCCTCGGG GCAAAGGACA TCGCCCGGGC CAAGCGTGTC
GTCGGCACCG GCGCCACGTT CTTTGTCGGG CTGGCGGTGC TGATCGCGCT CGCCGGGGCG
ATGCTGGCGG GGCCCATCGC GGCGCGCCTG CAAACCCCGC CCGATGTGCT GCCGCTGGCC
GTGACCTACC TGCGCGTCCA GTTCCTGGCG ATGCCGCTGC AGGCCGCCTA CATCTTCCTG
GCGATCCTGC TGCGCAGCAC CGGCGACAGC AAGACGCCGC TGCGCTTCCA GGTCGTCAGC
GTGGGGCTCG ATATCGCGCT CAACCCGCTG CTGATCGCGG GCGGGGGGCC GCTTCCCGCG
CTCGGCATCG CGGGCTCCGC CACCGCCACC CTGGTGGCGC AGGGCATCGG CCTGACGGCG
CTGGCCCGGC GCCTCTACCG CACCCGGCAC CTGCTCTGCC TGCGCGCCGA CGAAGCGCAT
CTGCTGCGCC CCGACCGGGG CATCCTCGCG GCCCTGGTCG CCAAGGGCCT GCCGATGGGG
CTCCACATGG CGGTGGTGTC GATGGCGGCG GTCATGATGA TGTCGCTGGT CAACCGCTTC
GGCGCCCAGT TGTCGGCGGC GTATGGCGCC TGCCTGCAGC TGTGGAACTA CATCCAGCTG
CCGGTGCTGG CGATGGGCAT GGCGGTCACG CCCATGGCGG CGCAGAACCT CGGCGCGCGC
CGGCTGGACC GGGTCGGGCG GATCGCGCGC ACCGGCATCG CGCTCAACAT CGCGATGGCC
GGCGGCATGG TGCTGGTGCT GCAGTGCTTC AGCCGCGCGG TGCTCGGCCT GTTCCTGCCG
GCCCAGCCGG AGACCCTGCA GGCCGCGCAG CACATCAACG CGGTGGTGGC GTGGGCCTTC
GTTCCGGTCG GCGTCACGTT CGTGCTGGGG AGCGTCATCC GCGCGTCGGG CACGGCGATC
CCGCCGCTGG TGATCCTGTT CCTCGCCCTG TGGTGCATCC GGCAGCCGGC CGCTGTGCTG
CTGATGGACG CCTGGGGCGC GGATGCGCTG TGGCTGAGCT TCGGCCTGGG CTCGGTCTCG
TCCATGCTGA TGTCGCTGGC CTATTACCGC TGGGCCGGCT GGCGCGCGGC GTTCCTGCCG
ACGGACGCGC CGGCGGCGGA ACGTGCCGCC GAGCGGCCCC GGGAAGATCA GGGCGCGGCG
CGCTGCTGA
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| Protein sequence | MPGEPAARPA PARMTDGPIA GTLFALFLPI LSGNLLQTLG SSVNAMWVGR MLGDTALAAA
ANGNAVIAFV VAMVMGIGTA ASILIGQSLG AKDIARAKRV VGTGATFFVG LAVLIALAGA
MLAGPIAARL QTPPDVLPLA VTYLRVQFLA MPLQAAYIFL AILLRSTGDS KTPLRFQVVS
VGLDIALNPL LIAGGGPLPA LGIAGSATAT LVAQGIGLTA LARRLYRTRH LLCLRADEAH
LLRPDRGILA ALVAKGLPMG LHMAVVSMAA VMMMSLVNRF GAQLSAAYGA CLQLWNYIQL
PVLAMGMAVT PMAAQNLGAR RLDRVGRIAR TGIALNIAMA GGMVLVLQCF SRAVLGLFLP
AQPETLQAAQ HINAVVAWAF VPVGVTFVLG SVIRASGTAI PPLVILFLAL WCIRQPAAVL
LMDAWGADAL WLSFGLGSVS SMLMSLAYYR WAGWRAAFLP TDAPAAERAA ERPREDQGAA
RC
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