| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05504 |
|---|
| Symbol | RSp1116 |
|---|
| ID | 1223428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 1414162 |
|---|
| End bp | 1415259 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637240981 |
|---|
| Product | putative low specificity L-threonine aldolase protein |
|---|
| Protein accession | NP_522677 |
|---|
| Protein GI | 17549337 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2008] Threonine aldolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.264443 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCGCG ATCCGATGCC GACCACCAGA ACACCCGCCC TGGGCTTTAC CAGCGACAAC
ATCGAAGGCG CGTCGCCCGA GGTGCTCGAT GCCATCCTTG CCGCCAATGC CGGTCAGGCG
GCCCCATACG GCGCGGATGA CTGCACCGCC CGGGTCGAGC AAACGCTGAG CGAGCTGTTC
GAGCGCGAAG TCAAAGTCTT CCTGGTCCCG ACCGGCACCG CGGCCAATGC GCTCTGCCTG
GGCGCGATGA CGCCGCCCTG GGGCAACGTG TACTGCCACC CGTCAAGCCA CATCAACAAC
GACGAGTGCG GTGCCCCCGA GTTCTATACG AACGGCGCGA AACTGGTCGC AGTGGATGGG
CCATCCGCCA AGATCGATGT GGAGAAGCTT CGCGCCGCCA CCCGCGTGAA GGTGGGCGAC
GTGCATTCCA CCCAGCCCGC TTGCGTCAGC CTGACGCAAG CGACGGAAGT CGGGAGCCTC
TACACGCTGA ATGAGATCGA AGCGATCGGA CAGCTCTGCA AGGACGCCCG CATCAAGCTG
CAGATGGATG GCTCGCGCTT TGCCAACGCG CTGGTCTCCC TGGGCTGCTC GCCCGCGGCA
ATGACATGGA AAGCGGGCGT CGATGCGCTG TCGTTCGGCG CGACCAAGAA TGGCGTCGTC
GCGGCGGAAG CCATTGTGCT GTTTGACCTG TCGCTCGCGG CCGAGATGGG CTACCGCCGC
AAGCGGGCCG GCCATCTGTT CTCGAAGATG CGTTTTCTGT CGGCCCAGAT CGAAGCCTAC
CTGGCCAACG ATCTCTGGTT GCGCAACGCA CGCCAGGCAA ACGACATGGC CCTGCGCCTG
GCCCGTGGCC TTGAAGGGAT GCATGGGGCC AGCGTGCTGG GCGCCACGGA AGCCAACATC
GTCTTCTGCC GCCTCCCCTC GACCCTCATT GAAAACCTGC TCCAGGCGGG ATTCCGCTTT
TATCACAATC GCTGGGAGCC GAACGTGGTG CGCTTTGTGA CGTCCTTCGC CACCACGGCC
GATGATGTCG ACAACCTGCT GCGGCATATG AAGGCCGCAG CCGCCGGGCC ATCGGCAGAC
ACCCATGCCA CCGCATGA
|
|---|
| Protein sequence | MNRDPMPTTR TPALGFTSDN IEGASPEVLD AILAANAGQA APYGADDCTA RVEQTLSELF
EREVKVFLVP TGTAANALCL GAMTPPWGNV YCHPSSHINN DECGAPEFYT NGAKLVAVDG
PSAKIDVEKL RAATRVKVGD VHSTQPACVS LTQATEVGSL YTLNEIEAIG QLCKDARIKL
QMDGSRFANA LVSLGCSPAA MTWKAGVDAL SFGATKNGVV AAEAIVLFDL SLAAEMGYRR
KRAGHLFSKM RFLSAQIEAY LANDLWLRNA RQANDMALRL ARGLEGMHGA SVLGATEANI
VFCRLPSTLI ENLLQAGFRF YHNRWEPNVV RFVTSFATTA DDVDNLLRHM KAAAAGPSAD
THATA
|
|---|
| |