| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05478 |
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| Symbol | RSp1140 |
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| ID | 1223452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1440282 |
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| End bp | 1441178 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637241005 |
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| Product | substrate-binding periplasmic (PBP) ABC transporter protein |
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| Protein accession | NP_522701 |
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| Protein GI | 17549361 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.207429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCCC GTGTCCGAAA ACTGCTGCCC GCGCTGCTTG CGTTCCCATT GCTGAATGTG
AATGCGGTGG CCTCCAGCCC CACGCTCGAC CACATCAAGG CAACGGGCGC CATCCGGCTG
GCCCATCGCG AAAGCTCGGT GCCGTTCTCG TACCTGGACG CCAACGGCAA GCCGATCGGC
TATTCGATGG ATCTGTGCAT GCGGCTGGTC GATGCCATCC GCGACAACCT CAAGCGGCCC
GACCTGAAGG TGCAGTATCT GCAGGTGACG CCCGCCACGC GGATGGACGC CATCATGAGC
GGCAAGGCCG ACCTGGAATG CGCCTCGACC AACAACGCGC GCGAGCGCCG CGAGAAGGTC
GCCTTCACCA TCCCGCATTA CATCGCCAAC GGCCGCATGC TGGTCAAGAC CGCATCCGGC
ATCCATCAGC TGGAAGACCT GCGGGGCAAG ACCGTGGTGT CGACGCGCGG CAGCGCGAAC
GGCAACCTGG TGCGCCAGCT CAGCGAGGCG GGCGGGCTGG GCATCACCGT CGTCGAAGCC
GGCGATCACG GTGAATCGTT TGCAATGCTG GCCGAGGGCA AGGCGCAGGC CTTCGCCATG
GACGACGTGC TGCTCGCCGG CATGAAGGCC AATGCCAAGA ACCCCGCCGA CTACGCGATC
GTCGGCAAGA CGCAGCAGGT GGTGCCGTAC GCCATCATGC TCAGCAAGAA CGATCCCGAG
TTCAAGAAGC TGATCGATGC GGCCATGTCG CGGCTCATGG AGGACGGCGA GGCGGAGCGC
CTCTACAAGA AATGGTTCCA GCAGCCGATC CCGCCGAACA ACGTCAATCT CGGCATCCCG
ATGAGCCTGC TGCTGCGCGA TTCCTTCCGC TACCCGACGG ACAACGCCGG TAACTGA
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| Protein sequence | MLPRVRKLLP ALLAFPLLNV NAVASSPTLD HIKATGAIRL AHRESSVPFS YLDANGKPIG
YSMDLCMRLV DAIRDNLKRP DLKVQYLQVT PATRMDAIMS GKADLECAST NNARERREKV
AFTIPHYIAN GRMLVKTASG IHQLEDLRGK TVVSTRGSAN GNLVRQLSEA GGLGITVVEA
GDHGESFAML AEGKAQAFAM DDVLLAGMKA NAKNPADYAI VGKTQQVVPY AIMLSKNDPE
FKKLIDAAMS RLMEDGEAER LYKKWFQQPI PPNNVNLGIP MSLLLRDSFR YPTDNAGN
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