Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS05461 |
Symbol | RSp0309 |
ID | 1222441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 404268 |
End bp | 404804 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637240169 |
Product | hypothetical protein |
Protein accession | NP_521870 |
Protein GI | 17548530 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.797488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.144264 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATCC AACACGCCCT GCTTACTTCC CTGCTTGAAA AACCGTCGTC CGGCTACGAA CTCGCCCGCC GCTTCGACAA ATCGATGGGT TATTTCTGGA GTGCTACCCA CCAGCAGATC TACCGCGAAC TCGGCCGCAT GGCCGAAGTC GGCTGGGTCA GCGTGGAAGA AGAGGAAGAC GGCCGCAAGA AGACCTACAC CGTGCTGCCG TCGGGCCGTG AAGAACTGAT CCGCTGGGCG CTGGAGCCGA CCGTGTCGTC GGACAACCGC GAGGAGCTGC TCGTCAAGCT GCGCGCCGAA GCGGTGATCG GCCCGATCGG CCTGGCCGAC GAGATGCAGC GCCTGATCGA GCAGCACCGC GCGCGCCTGG CCACCTACCG CGAGATCGAG CAGCGCGATT TCTCCGGCAC CGGCCTGACG CGCGTGCAGC GCCTGCAGCA TACCGTGCTC AGGCGCGGCA TCGTCTATGA GGAAGGCTGG CTCGTGTGGG CAGGCGAGGT GCTGCCGCTG CTGGAGCCGG CCTCCGTTCC GGCCTGA
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Protein sequence | MSIQHALLTS LLEKPSSGYE LARRFDKSMG YFWSATHQQI YRELGRMAEV GWVSVEEEED GRKKTYTVLP SGREELIRWA LEPTVSSDNR EELLVKLRAE AVIGPIGLAD EMQRLIEQHR ARLATYREIE QRDFSGTGLT RVQRLQHTVL RRGIVYEEGW LVWAGEVLPL LEPASVPA
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