| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05432 |
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| Symbol | RSp1155 |
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| ID | 1223467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1454072 |
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| End bp | 1456819 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637241020 |
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| Product | hypothetical protein |
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| Protein accession | NP_522716 |
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| Protein GI | 17549376 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGTT TCACCCCGGC CCACGCTGGT GCCTATCCTG TCGACGCTGT CCTCGTATCG
GAGCCCGTGG TGCGCCCGGT GGATCCGCCC CTCGCCGCCG CGCTGGCGGA CGCGGTGGAA
TTCGATACGC TCGCGTGCCT GTCGGCCGAT GCCGTGCTGG TGGTGGTCGA CGGGCGCATC
GTCCAGGGCA ACCAGGCCGC CACGCATCTG CTGGCCGCGC CGGTGCCCGA GTGGCTGGCC
GGCGTGGCGC TCACCAGCGT GATCCATCCG GACGACGTCG GGCTGGTCAT GCCGAGCCTG
TCGCGCGCTG CCGCCGGTAG CGTGCCTGCC GACCCCATCG AACATCGCCT GGTGCGTGCC
GATTTCACCC ACGTGCTGGT CACCAGCGAA GCCGCGCGCT GCACGCATGC CGGGCAGCCG
GCGGTGATGC TCGTCCTGCG CGAGGCGGGT TCGCGCCATG CGCTCGAACG CAATGCCGTG
CAGGCCCGCG CAGAGGCCCT GCACGCGCGC CGCCTGCTGG CCTCGGAGAA TGCCGTGCTT
GCGCAACTCG CTTCCAATGC TTCGCTGTCG ACCGTGCTGC GCCATCTGTG CCTGTATGTC
GAGCAGGTCT ATCCGAACGC GATGTCGGCC GTGCTGCTGC TCGATGCCGA GCGCCAGACG
CTGGGCGTGG CCGCGGCGCC CACGCTGCCG GCCGCCTATG CCACCACGCT GGAGGGCTCG
CCCATCGGCC CCGATGCCGG CGCCTGCGGC TGCGCGGCGT ATCTGGGCGA TGCCGCGCTG
ATCGGCGATA TCGCCACCGA CCCGCGCTCG CAGCATGACC GCACGGCGGC GCTTGCCGCC
GGCTTCGCCT CCGCCTGGGC GCTGCCGATC CGCGCTTCGC GCGGCGACAA ACTGGGCGTG
CTGGCGCTGT TTCACCGCCA GTCCTGCCTG CCGACCGAGG ACGAGCAGCA ATTCCTCGAC
GACGTCACGC ACCTGGCCGG CGTCGCCATC CAGAAGGACG CCACCGAGCG CGGCCTGGCC
GAGAGCGAGG AGCGCTACCG GCTGGCGGTC TCGCACCTCA ACGAAGGCGT GCTGATCCAG
ACGCTGGACG GCGTGGTGCT GGCCGCCAAT GCCAGCGCCG AGCGCATCCT GCGCGTGCGT
CCGGGGCAAC TGGTCGGGCG CAACCGGTTC GACATGATGC AGCGCGTGGT CGACGAGCAC
GGCAAGGATG TCGCGCTCGA CGTGCTGCCC TCGAAGCTGG TGCGGCAGAG CGGCGAAGCC
ATCCTCGGAC GCATCTACGG CCTGCTGCTG AAGACCGGCG AGCTGATCTG GGCCCGGATG
AACATCATCC CGATCCGTCG CCATGGCGAT GCGGCACCGT CCAGCATCAT GCTGTCGTTC
GCCGATATCA CCGATTTCAA GCGCGCCGAG CAGCGCCTGC GCCATCTGGC CTCGCACGAT
GCGCTGACCG GGCTGACCAA CCGCAGCTTC TTCATCGCCC ACCTGGACAG CGCCATTGAG
CGTGCCCGCG ACGAGAGCCG CGAGCTGGCC CTGTTCTTCC TGGACCTGGA CCGCTTCAAG
AGCGTCAACG ACACCGCCGG CCATGCCTGC GGCGACACCC TGCTGCAGAG CGCCGCCGCG
CGCCTGACCG ACTGCATCGG CCCCGGCGAC GTGATCGCCC GGCTGGGCGG CGACGAGTTC
GTCATCCTGA TCGAGCAGCG CGTCGAGGGC AAGCGCATCG CGCAGCTGGC CGAGCGCCTG
CTGGCGGCCA TGCGCGAGCC GTTCGATACC GTCAATGGGC GCTATTACCT GGGCGTGTCG
ATCGGCGTGG CGCTGTATCC GCACGACGGC ATCTCCGGCT CCGACCTGCT GCGCTCGGCG
GACGCGGCGA TGTACCGCGC CAAGCAGAAC GGCCGCAACC GCGCGCAGTT CTACACGGCC
GAGCTCAATG CCCGCCTGCA GCGCCGCTAC CTGCTGGAAA CCGCGCTGCG CGACGCGCGC
GACAACAGCG AGCTGCAGCT CGTCTACCAG CCCAAGTACG ACCTGGCCAG CCATCGCATC
GTCGGCGCCG AGGCGCTGCT GCGCTGGAAC AGCGTCAAGC TGGGGGCGGT GTCGCCGGCG
GAGTTCATCC CGGTGGCCGA AGAGACCGGG CTGATCGTGC CGATCGGCGA GTGGGTGCTG
CGCCGCGCCT GCGAGCAGGC CGTGGAGTGG TATCAGGCGC TGGGCTACGA CTTCCGCATG
GCGGTCAACC TGTCCGCGCG TCAGTTCCAG ACCGGCGACG TGGTGCCGAC GATCGAGCAG
ACCCTGGCCG AGACCGGCCT GCCGCCGACC GCGCTGGAGG TGGAGATCAC CGAAAGCCTG
CTGATGGGCG GCGCCGACGA GGTGCGCCCG ATGTTCGACG CGCTCACCGC GCAGGGCATC
CGCATTTCCA TCGACGATTT CGGCACCGGC TATTCGTCGC TGTCGTACCT GCAGCGCTTC
CCGATCAGCA ACGTGAAGAT CGACCGGTCG TTCATCCTCG GCATTCCCGG CGACCCCGAC
TCGGTGGCGC TGACGGAGGC CATCGTCGCC ATGGCCCGCG CGCTGGGCAT GACGGTCACC
GCCGAAGGCG TGGAAGACGC CGACCAGGTG GAGTTCCTGG CCAAGGCGGG CTGCCAGGAG
ATCCAGGGCT ACTACATCGG CAAGCCGGTC ACCGCCGAGG GGTTCGACCG GCTGCTGCGG
GCGCACCTGG CGGTGGTCGA TGCCGGGGTG CGCACGGCGG CGGGCTGA
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| Protein sequence | MTRFTPAHAG AYPVDAVLVS EPVVRPVDPP LAAALADAVE FDTLACLSAD AVLVVVDGRI
VQGNQAATHL LAAPVPEWLA GVALTSVIHP DDVGLVMPSL SRAAAGSVPA DPIEHRLVRA
DFTHVLVTSE AARCTHAGQP AVMLVLREAG SRHALERNAV QARAEALHAR RLLASENAVL
AQLASNASLS TVLRHLCLYV EQVYPNAMSA VLLLDAERQT LGVAAAPTLP AAYATTLEGS
PIGPDAGACG CAAYLGDAAL IGDIATDPRS QHDRTAALAA GFASAWALPI RASRGDKLGV
LALFHRQSCL PTEDEQQFLD DVTHLAGVAI QKDATERGLA ESEERYRLAV SHLNEGVLIQ
TLDGVVLAAN ASAERILRVR PGQLVGRNRF DMMQRVVDEH GKDVALDVLP SKLVRQSGEA
ILGRIYGLLL KTGELIWARM NIIPIRRHGD AAPSSIMLSF ADITDFKRAE QRLRHLASHD
ALTGLTNRSF FIAHLDSAIE RARDESRELA LFFLDLDRFK SVNDTAGHAC GDTLLQSAAA
RLTDCIGPGD VIARLGGDEF VILIEQRVEG KRIAQLAERL LAAMREPFDT VNGRYYLGVS
IGVALYPHDG ISGSDLLRSA DAAMYRAKQN GRNRAQFYTA ELNARLQRRY LLETALRDAR
DNSELQLVYQ PKYDLASHRI VGAEALLRWN SVKLGAVSPA EFIPVAEETG LIVPIGEWVL
RRACEQAVEW YQALGYDFRM AVNLSARQFQ TGDVVPTIEQ TLAETGLPPT ALEVEITESL
LMGGADEVRP MFDALTAQGI RISIDDFGTG YSSLSYLQRF PISNVKIDRS FILGIPGDPD
SVALTEAIVA MARALGMTVT AEGVEDADQV EFLAKAGCQE IQGYYIGKPV TAEGFDRLLR
AHLAVVDAGV RTAAG
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