| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05405 |
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| Symbol | RSp0928 |
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| ID | 1223235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1168588 |
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| End bp | 1171731 |
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| Gene Length | 3144 bp |
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| Protein Length | 1047 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637240788 |
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| Product | cation efflux system transmembrane protein |
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| Protein accession | NP_522489 |
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| Protein GI | 17549149 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCGC GCCTCATCTT CGCCTCCATC CGCAACCGCT TCCTGGTGCT GCTGACTACG
GCCTTGCTGA CGGCGTGGGG GCTGTGGGCG GTACGCAGCA CGCCGCTCGA TGCGCTGCCC
GATCTGTCGG ACGTGCAGGT CATCATCCGC ACCCCCTTCC CGGGCCAGGC CCCGCAGATC
GTCGAGAACC AGGTCACCTA TCCGCTCACC ACCACGATGC TGTCGGTGCC GGGGGCCAAG
ACGGTGCGCG GCTATTCGTT CTTTGGGGAT TCGTTCGTCT ACGTGCTGTT CGAAGACGGG
ACGGATCTGT ACTGGGCGCG CTCGCGTGTG CTGGAGTACT TGAATCAGGT GCAGTCCCGC
CTGCCGGTGG CGGCCAAGCC GGCATTGGGG CCGGATGCGA CCGGCGTCGG CTGGGTCTAC
GAATACGCGC TGGTCGACAA AACCGGCCGC CACGACCTGG CCCAACTGCG CGCGCTGCAG
GACTGGTTCC TGCGCTTCGA GCTGAAGGCA TTGCCGAACG TGGCGGAAGT GGCGTCCGTG
GGCGGCATGG TCAAGCAGTT CCAGGTGGTG CTGCAGCCGG ACAAGCTGCG CGCGTACAAC
CTGTCGCAGG CCAAGGTGCT GGCGGCGCTC AAGGGCGCCA ACCAGGAGAC CGGCGGGTCC
GTGCTGGAGT TGGGCGAAGC CGAGTACATG GTGCGCGCCA GCGGCTACCT GAAGACGCTC
GACGACTTTC GCCAGATTCC GCTGGCAACG AGCGATGCCG GTGTCGCCGT GCGGCTGGGC
GACGTCGCCA CCGTCCAGCT CGGACCCGAG ATGCGGCGCG GCATCGCCGA GCTGGACGGT
CAGGGCGAAG TCGCTGGCGG TGTCATCGTG ATGCGCTCCG GCAAGAACGC GCTGGAGACG
ATCGAGGCCG TCAAGGCCAA GCTCGCCGCG CTGCGGAAGA GTCTGCCGGT GGGCGTGGAG
ATTGTGCCGG TCTACGACCG CTCTGCGCTC ATCCACCGCG CGGTGGACAA CCTCACGCAC
AAGCTGATCG AGGAGTTCAT CGTGGTGGCG CTGGTGTGCG TGGTGTTCCT GTTTCACCTG
AGATCGGCCT TGGTGGCGAT CGTCTCGCTG CCGCTGGGCG TGCTGGCGGC GTTCCTGGTG
ATGCGCTACC AGGGCGTGAA CGCCAACATC ATGTCGCTGG GCGGTATCGC CATCGCGGTG
GGCGCCATGG TGGATGCGGC CGTGGTGATG ATCGAGAACG CGCACAAGCA CCTGGAGCGC
TGGCACGAGG CACATCCGGG GCACGCGCTG GCCGGGCACG AGCGCTGGGG TGTCATCGGC
GAAGCGGCTG CGGAGGTGGG GCCGGCGCTG TTCTTCTCGC TGCTGATCAT CACGCTGTCG
TTCATCCCGG TGTTCACGCT GGAGGCGCAG GAGGGGCGGC TGTTCTCGCC GCTGGCCTTC
ACCAAGACGT ATTCGATGGC GGCGGCGGCT GGGCTGTCGG TCACGCTGGT GCCGGTGCTG
ATGGGCTACC TGATCCGCGG GCAGATCCCG AGCGAGCAGT CGAACCCGCT CAGCCGCTGG
CTGATCCGCC TGTACCAGCC GGTGCTGGCC CGTGTACTGG CGTACCCGCG GGCGACGGTG
GCCATCGCCC TTGTGCTGCT GGCGGCCACG GCCTGGCCGA TCCTGCGTAC GGGCGGCGAG
TTCATGCCGC CGCTGGACGA AGGCGACCTG CTGTACATGC CGTCGGCGCT GCCGGGGTTG
TCGGCCGGCA AGGCGGCACA GTTGCTGCAG CAGACCGACC GGCTCATCAA GACCGTGCCC
GAGGTGGCCA CGGTGTTCGG CAAAGCGGGC CGCGCCGACA CCGCCACCGA TCCGGCGCCG
ATGGAGATGT TCGAGACCAC CATCCGGTTC AAGCCGCGCG ACCAGTGGCG GCCGGGCATG
ACGACCGACA AGCTGGTCGA CGAGCTGGAC CGCGTGGTCA AGGTGCCGGG CCTGTCCAAC
ATCTGGGTGC CGCCCATCCG CAACCGCATC GACATGCTGG CCACCGGCAT CAAGAGCCCG
GTCGGCATCA AGGTGGCGGG CACCGACCTG CAGCAGATCG ACCGGCTCAC CACGCAGATC
GAGGCCGCGG TCAAGACCGT GCCCGGCGTC ACTTCGGCAC TGGCCGAGCG GCTCTCAGGC
GGACGCTACA TCGACGTCGA CATCCACCGC ATGGCCGCCG GCCGCTACGG CCTGAACATC
GAGGACGTGC AGAGCATCGT GGCCTCCGCC ATCGGCGGCG ACAACGTCGG TGAAGTCGTG
GACGGGCTGG CGCGCTTTCC GGTCAACCTG CGCTATCCGC GCGACTACCG GGATTCGGTC
GAGCAATTGC GCAGCCTGCC GATCGTGACG GACCGGGGCC AGCAGATCGT GTTGTCCGAC
GTGGCGGACA TCCGCGTCGT GTCAGGCCCG CCGATGCTGC GCAGCGAGAA CGCGCGCCTG
TCCGGCTGGG TGTACGTGGA CATCCGCGGG CGCGACCTGC GCTCGGCGGT GCGCGACATG
CAGGCGGCGG TGGCCAAGGC GGTGCCGATG CCGGCCGGCT ATGCACTGAG CTGGTCCGGC
CAGTTCGAAT ATCTGGAGCG CGCCAGCACC AAGCTCAAGG TGGTGGTGCC GTTCACGCTG
CTCATCATCT TCGTGCTGCT GTACCTGGTA TTCGGCCGCA TCGACGAGGC ACTGTTGATC
ATGGGCACGC TGCCGCTGGC GTTGATCGGC GGGTTCTGGC TGCTGTACGG GCTGGGCTAC
AACTTGTCAG TAGCGGGCGT GGTCGGCTTC ATTGCGCTGG CGGGTGTGGC GGCGGAGTTC
GGCGTCATCA TGCTGCTCTA CCTCAAGCAG GCCTGGACCG AGCGCCAGGA GCGCGGCCAA
ACCACGACTG ACGCATTGCT TGAGGCCATC CAGGAAGGCG CCGTACTGCG CGTACGCCCC
AAGGCCATGA CGGTGGCCGT CGTCCTGGCC GGCCTGATCC CGATCATGTG GTCACACGGC
ACGGGCTCCG AAGTCATGCA GCGCATCGCC GCGCCGATGG TCGGCGGCAT GGTGACCGCG
CCCTTGCTTT CTCTGCTTGT TGTTCCTGCT GTCTACCTGC TGTTGCGCAG GCGCAGCGTG
TCATCCCCTT CCCAACCCCG CTAG
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| Protein sequence | MIARLIFASI RNRFLVLLTT ALLTAWGLWA VRSTPLDALP DLSDVQVIIR TPFPGQAPQI
VENQVTYPLT TTMLSVPGAK TVRGYSFFGD SFVYVLFEDG TDLYWARSRV LEYLNQVQSR
LPVAAKPALG PDATGVGWVY EYALVDKTGR HDLAQLRALQ DWFLRFELKA LPNVAEVASV
GGMVKQFQVV LQPDKLRAYN LSQAKVLAAL KGANQETGGS VLELGEAEYM VRASGYLKTL
DDFRQIPLAT SDAGVAVRLG DVATVQLGPE MRRGIAELDG QGEVAGGVIV MRSGKNALET
IEAVKAKLAA LRKSLPVGVE IVPVYDRSAL IHRAVDNLTH KLIEEFIVVA LVCVVFLFHL
RSALVAIVSL PLGVLAAFLV MRYQGVNANI MSLGGIAIAV GAMVDAAVVM IENAHKHLER
WHEAHPGHAL AGHERWGVIG EAAAEVGPAL FFSLLIITLS FIPVFTLEAQ EGRLFSPLAF
TKTYSMAAAA GLSVTLVPVL MGYLIRGQIP SEQSNPLSRW LIRLYQPVLA RVLAYPRATV
AIALVLLAAT AWPILRTGGE FMPPLDEGDL LYMPSALPGL SAGKAAQLLQ QTDRLIKTVP
EVATVFGKAG RADTATDPAP MEMFETTIRF KPRDQWRPGM TTDKLVDELD RVVKVPGLSN
IWVPPIRNRI DMLATGIKSP VGIKVAGTDL QQIDRLTTQI EAAVKTVPGV TSALAERLSG
GRYIDVDIHR MAAGRYGLNI EDVQSIVASA IGGDNVGEVV DGLARFPVNL RYPRDYRDSV
EQLRSLPIVT DRGQQIVLSD VADIRVVSGP PMLRSENARL SGWVYVDIRG RDLRSAVRDM
QAAVAKAVPM PAGYALSWSG QFEYLERAST KLKVVVPFTL LIIFVLLYLV FGRIDEALLI
MGTLPLALIG GFWLLYGLGY NLSVAGVVGF IALAGVAAEF GVIMLLYLKQ AWTERQERGQ
TTTDALLEAI QEGAVLRVRP KAMTVAVVLA GLIPIMWSHG TGSEVMQRIA APMVGGMVTA
PLLSLLVVPA VYLLLRRRSV SSPSQPR
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