| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05404 |
|---|
| Symbol | RSp0929 |
|---|
| ID | 1223236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 1171740 |
|---|
| End bp | 1172084 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637240789 |
|---|
| Product | putative signal peptide protein |
|---|
| Protein accession | NP_522490 |
|---|
| Protein GI | 17549150 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5569] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACA CATTCGCTCT GGCTTTCACC CTGGCGCTGG CCGCGTCACC CGTGGCATTC
GCCGCCACCC CGATGGACGG CATGGACATG AAGCCGGCCG CCCAGGCTGG CCGGTCCAAC
CCGGCGCCCA AGCCGGTCGC GGCCGAGATC CGCAAGATCG ACCCCGACAC CGGCAAGGTC
ACGCTCAAGC ACGGCGCCAT CGACAACCTC GGCATGGGTG CCATGACGAT GACGTTTGCC
GTCAAGGACA AGGCTTCGCT CAAGGGCTTC AAGGAGGGTG ACAAGGTGTC GGCGGTCTTC
GATAGGGTCA ATGGTCAGCC GACCGTGGTC CAGATGCGCC CCTAG
|
|---|
| Protein sequence | MKHTFALAFT LALAASPVAF AATPMDGMDM KPAAQAGRSN PAPKPVAAEI RKIDPDTGKV
TLKHGAIDNL GMGAMTMTFA VKDKASLKGF KEGDKVSAVF DRVNGQPTVV QMRP
|
|---|
| |