| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05400 |
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| Symbol | RSp0933 |
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| ID | 1223240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1181038 |
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| End bp | 1181784 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637240793 |
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| Product | amino acid ABC transporter transmembrane protein |
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| Protein accession | NP_522494 |
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| Protein GI | 17549154 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.669152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGATC TGGTCGATAT CGTTAGCGAC AACTGGCTGC TGCTGCTGGT CGGGCAGTAC
CCGAACGGCC CGCTGGGCGG CATTGCGTGC ACACTGATTC TGTCCGTGCT CGGCATCGTG
CTCGCGTTTC CGCTGAGCGT GCTGCTGGCA CTGGCGCGGT TGTCGCCCTG GTCGGCGCTA
CGCTCGGTGG TCACCGCACT GGTGTATGGG GTGCGCGGTG TGCCGTTGCT GATGTTGATC
CTCTGGGTGT ACTTCCTGGT GCCCCTGTTC ATCGGGCGGG ATGTCTCGGG CTTCACCACG
ATGCTGTGCA CGCTCGTGAT CTATGAAGGC GTCTACCTGA GTGAGGTCGT GCGTGCCGGT
ATCGAGGCGC TGCCGAAGGG CCAGATGGAG GCCGCACGCG CGCTGGGGCA CAGCTACCTC
GGTGCCATGC GCGTGGTGAT CCTGCCGCAG GCCCTCTACA ACATGCTGCC GAGCATGCTG
GCCCAGTTCG TGTCCACCAT CAAGGAAACC ACGCTCGGTT ACGTCATCAA CGTGCCCGAG
CTGACATTCG CAGCCAACCA GATCAACAAC GCGCTGCTGA GCAAGCCGTT CCAGATCTTC
TTCCTGCTGG CGGTCATCTA CTTTGCCGTG TGCTGGAGCC TGACACGCGC GGCGCGCGCG
CTGGAGCACC GCATCGCCGC CAAGCGGGCG GGCAAGCGCC GCGTGCCCGC GCCGGAGGTA
CCCGAGCCGC TGCCGGTTGA ACCCTGA
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| Protein sequence | MMDLVDIVSD NWLLLLVGQY PNGPLGGIAC TLILSVLGIV LAFPLSVLLA LARLSPWSAL
RSVVTALVYG VRGVPLLMLI LWVYFLVPLF IGRDVSGFTT MLCTLVIYEG VYLSEVVRAG
IEALPKGQME AARALGHSYL GAMRVVILPQ ALYNMLPSML AQFVSTIKET TLGYVINVPE
LTFAANQINN ALLSKPFQIF FLLAVIYFAV CWSLTRAARA LEHRIAAKRA GKRRVPAPEV
PEPLPVEP
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