| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05399 |
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| Symbol | RSp0934 |
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| ID | 1223241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1181788 |
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| End bp | 1182489 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637240794 |
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| Product | amino acid ABC transporter transmembrane protein |
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| Protein accession | NP_522495 |
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| Protein GI | 17549155 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.66216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGGCT TTGATCTGAT GGCGATCCTG AAGAACCCCG AGTTCAGCAG GATGCTGATC
GAGGGTGTCT GGATGACGCT GGTGATCGCC GGGTGCTCAT GGGTGCTGGG CATGGCGCTG
GCCTTCGTGC TGCTGGCGCT GCGGATGGTG CCCAACCCGC TGGCCGAGCG CTTTGTCGGG
GCGTATGTCT CATATCACTG CAACGTGCCG ACGCTGGTGC AGCTGATGTT CTGGTACTTC
GGTATCTCCA CCTTGCTGCC GCTTCCCGCG CTGGATTGGC TGGGCGAGCA TCACTCCGAA
GTCGTCTTTG CGATCGTGGC GCTGGGCCTG TGCCAGGCCG CGTACTTCAG CGAAGACCTG
CGCTCGGGCT TGCGTGCGAT TCCGCCGGGC CAGGAGGAAG CGGCCCGCGC ACTGGGCAAC
ACCTTCATCG GCACCCTGCG CTACGTGCTC CTGCCGCAGG CCGTGCGCAA TGCGCTGCCG
GCGCTGATCA ACCATAGCGT TTCGCTGTTC AAGAACAGCA GCCTCGCGAT GGCGATCGGT
GTCACGGAGA TGACCCATGC CGTCAAGGAG ATCGAGAACG CCAGCTTCCG GGCCTTCGAA
TCGTATTTGC TGGCGACGCT CATGTACCTG GGCTTCTCGC TCGTCATCAT GGCGGTCGGC
GCCTGTCTGG CCCGCCGCTT CCGCGTCGTG ACGGGGAGGT AA
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| Protein sequence | MQGFDLMAIL KNPEFSRMLI EGVWMTLVIA GCSWVLGMAL AFVLLALRMV PNPLAERFVG
AYVSYHCNVP TLVQLMFWYF GISTLLPLPA LDWLGEHHSE VVFAIVALGL CQAAYFSEDL
RSGLRAIPPG QEEAARALGN TFIGTLRYVL LPQAVRNALP ALINHSVSLF KNSSLAMAIG
VTEMTHAVKE IENASFRAFE SYLLATLMYL GFSLVIMAVG ACLARRFRVV TGR
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