| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05364 |
|---|
| Symbol | RSp0831 |
|---|
| ID | 1223138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 1050296 |
|---|
| End bp | 1051144 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637240691 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_522392 |
|---|
| Protein GI | 17549052 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.024551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGA TCCATACCCA GGCGCTTGCC GATCCGCTGG CCGGCATCGC CACGCGCTGC
CACCGCCTGC TGCTGACGGG CGCGGGCGGC AACCTCGGCA AGGTGCTGCG CGAGCGGCTG
ACGCGCTATG CCGAGGTGCT GCGCGTGTCC GATATCACCG ACCTGTGCGC CGCGCGCGCC
GGCGAGGAGG TTGTGCCGTG CGACCTGGCC GATGCGCAGG CGGTCGATGC GCTGGTGAAG
GGCGTGGACG CGATCGTCCA CCTGGGCGGC ATCTCCGTCG AGCGGCCGTT CGACGAGATC
CTGCCGGCCA ACATCCAGGG CACCTATCAC CTGTACGAAG CCGCGCGCCG GCATGGCGTG
AAGCGCATCG CCTTCGCCAG CTCGAACCAC GCCATCGGCT TCTACCGGCA GGGCGAGGTC
ATCGACGCGC GCGTGCCGAC GCGGCCCGAC GGCTACTACG GGCTGAGCAA GGTCTTCGGC
GAGCAGCTCG GCAGCTTCTA TTTCGACCGC TACGGCATCG AGACCGTCGC CATCCGCATC
GGCTCGTCGT TCCCCGAGGC GAAGGACCGC CGCATGCTGG TCACCTGGCT CGGCTACGAC
GATCTGGAGC AATTGATCCG CCGCGCGCTG TTCGTGCCAA ACGTTGGCTT CACCATCGTC
TACGGCATGT CGGGCAACCG CGAAGCCTGG TGGGACAACC GCCACGCCGC GCATCTCGGC
TACGTGCCCG CGCAGAGCAG CGAAGCCTTC CGCGCCCAGG TCGAAGCGCA GCCGCCGCTG
GCGGCCGACG ACCCGGCGGC GCGGTTCCAG GGCGGCGCCT TCGTCAAGGC CGGCCCGTTC
GGAGACTGA
|
|---|
| Protein sequence | MTTIHTQALA DPLAGIATRC HRLLLTGAGG NLGKVLRERL TRYAEVLRVS DITDLCAARA
GEEVVPCDLA DAQAVDALVK GVDAIVHLGG ISVERPFDEI LPANIQGTYH LYEAARRHGV
KRIAFASSNH AIGFYRQGEV IDARVPTRPD GYYGLSKVFG EQLGSFYFDR YGIETVAIRI
GSSFPEAKDR RMLVTWLGYD DLEQLIRRAL FVPNVGFTIV YGMSGNREAW WDNRHAAHLG
YVPAQSSEAF RAQVEAQPPL AADDPAARFQ GGAFVKAGPF GD
|
|---|
| |