Gene RS05343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS05343 
SymbolRSp1298 
ID1223610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1647457 
End bp1648632 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content66% 
IMG OID637241161 
Producthypothetical protein 
Protein accessionNP_522857 
Protein GI17549517 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAC CGGATTGCAT CCACGTTGAT CGCCGCACTG TACTCAAGAG CGCACTCGCC 
GCCGCCGCGG TGCAGCTGGC GCCTGCGTTC ATCCGCCAAG CGCGCGGCGA AGCGCCCCTG
CGCATCGGCA TGGTCGACCC GATGACCGGC GTCTACGCGG CCGTCGCGCA GAACGAAGTC
ACGGGCGCCA GGCTCGCCGT GGCGCAGATC AACGCCCGGG GCGGCATCCT CGGCCGGCCA
ATCGAGCTGC TGGTGGAAGA CTCGGCCAAC GACGTCGGCA CCGGCGTGCA GAAGGCGCGC
AAGCTGATCG AGCGAGACCA GGTGAGCTTC CTGATCGGCG ATGTGAACTC CGGCATCGCG
CAGGCCATCG CGCAGGTCAG CAACGAGAAG AAGGTGCTGC ACATCGTCTC GGGCGGCCAC
ACCGACACCA TCACCGGCAG CGACTGCAAG TGGAACGTCT ACCGCGTCTG CAACACCACC
AGCATGGAAG CCAACGCGGT GGCCAACCTG CTGTTCTCCA AGTACGGCAA GAAGTGGCAC
TTCATCACGC CGGACTACGC CTTCGGCCAC ACCCTGCAGA AAGCCGCGGC GGCCGACCTG
CAGAAGCTCG GCGGCACCAT CACCGGCAAC GAGCTGACGC CGCTGGGCAC CACGGATTTC
TCCGCCTACC TCATCAAGGC GCGCGCGGCC AATCCGGACG TGCTGCTGGT GCTGCCGCAG
GGCTCGGACA TGGTCAACTG CCTCAAGCAG ATCGCCCAGT TCGGCATCGG CAAGCAGATG
CATATCGCCG GGCTGCAGCA GGAGCTCGAA TCGCTCGAGG CGATGCCGCC GGAGGCGCGC
GTCGGCATCT GGATGTTCGA GTGGTACTGG AAGCAGCCGG GCGTGCCGGG CGTCGAGCAG
TTCGTCGCCG ACATCCGCAA GGTCAACAAC GGCAAGGTGC CCACCGCGCG CCACTGGTTC
GGCTTCACCT CGGTGCACAC CCTGGCCGCG GTCGCCAACC GCGAGAAGAC CCTCGATTCG
AGAAAGCTCG CCGAAGCGCT GGGCGGCTTC GCGCTGGCCG ACGACGTCAA GCTGCAGCCC
AACAAGTGCT ACTACCGCAA GGGAGATCAC CAACTGATGA CGTCGTCCTT CGTGGGCGAA
GCGCTGTCCA GGCCGGCGGG GGACCCGGAA GACTGA
 
Protein sequence
MTTPDCIHVD RRTVLKSALA AAAVQLAPAF IRQARGEAPL RIGMVDPMTG VYAAVAQNEV 
TGARLAVAQI NARGGILGRP IELLVEDSAN DVGTGVQKAR KLIERDQVSF LIGDVNSGIA
QAIAQVSNEK KVLHIVSGGH TDTITGSDCK WNVYRVCNTT SMEANAVANL LFSKYGKKWH
FITPDYAFGH TLQKAAAADL QKLGGTITGN ELTPLGTTDF SAYLIKARAA NPDVLLVLPQ
GSDMVNCLKQ IAQFGIGKQM HIAGLQQELE SLEAMPPEAR VGIWMFEWYW KQPGVPGVEQ
FVADIRKVNN GKVPTARHWF GFTSVHTLAA VANREKTLDS RKLAEALGGF ALADDVKLQP
NKCYYRKGDH QLMTSSFVGE ALSRPAGDPE D