Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS05343 |
Symbol | RSp1298 |
ID | 1223610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1647457 |
End bp | 1648632 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637241161 |
Product | hypothetical protein |
Protein accession | NP_522857 |
Protein GI | 17549517 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACAC CGGATTGCAT CCACGTTGAT CGCCGCACTG TACTCAAGAG CGCACTCGCC GCCGCCGCGG TGCAGCTGGC GCCTGCGTTC ATCCGCCAAG CGCGCGGCGA AGCGCCCCTG CGCATCGGCA TGGTCGACCC GATGACCGGC GTCTACGCGG CCGTCGCGCA GAACGAAGTC ACGGGCGCCA GGCTCGCCGT GGCGCAGATC AACGCCCGGG GCGGCATCCT CGGCCGGCCA ATCGAGCTGC TGGTGGAAGA CTCGGCCAAC GACGTCGGCA CCGGCGTGCA GAAGGCGCGC AAGCTGATCG AGCGAGACCA GGTGAGCTTC CTGATCGGCG ATGTGAACTC CGGCATCGCG CAGGCCATCG CGCAGGTCAG CAACGAGAAG AAGGTGCTGC ACATCGTCTC GGGCGGCCAC ACCGACACCA TCACCGGCAG CGACTGCAAG TGGAACGTCT ACCGCGTCTG CAACACCACC AGCATGGAAG CCAACGCGGT GGCCAACCTG CTGTTCTCCA AGTACGGCAA GAAGTGGCAC TTCATCACGC CGGACTACGC CTTCGGCCAC ACCCTGCAGA AAGCCGCGGC GGCCGACCTG CAGAAGCTCG GCGGCACCAT CACCGGCAAC GAGCTGACGC CGCTGGGCAC CACGGATTTC TCCGCCTACC TCATCAAGGC GCGCGCGGCC AATCCGGACG TGCTGCTGGT GCTGCCGCAG GGCTCGGACA TGGTCAACTG CCTCAAGCAG ATCGCCCAGT TCGGCATCGG CAAGCAGATG CATATCGCCG GGCTGCAGCA GGAGCTCGAA TCGCTCGAGG CGATGCCGCC GGAGGCGCGC GTCGGCATCT GGATGTTCGA GTGGTACTGG AAGCAGCCGG GCGTGCCGGG CGTCGAGCAG TTCGTCGCCG ACATCCGCAA GGTCAACAAC GGCAAGGTGC CCACCGCGCG CCACTGGTTC GGCTTCACCT CGGTGCACAC CCTGGCCGCG GTCGCCAACC GCGAGAAGAC CCTCGATTCG AGAAAGCTCG CCGAAGCGCT GGGCGGCTTC GCGCTGGCCG ACGACGTCAA GCTGCAGCCC AACAAGTGCT ACTACCGCAA GGGAGATCAC CAACTGATGA CGTCGTCCTT CGTGGGCGAA GCGCTGTCCA GGCCGGCGGG GGACCCGGAA GACTGA
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Protein sequence | MTTPDCIHVD RRTVLKSALA AAAVQLAPAF IRQARGEAPL RIGMVDPMTG VYAAVAQNEV TGARLAVAQI NARGGILGRP IELLVEDSAN DVGTGVQKAR KLIERDQVSF LIGDVNSGIA QAIAQVSNEK KVLHIVSGGH TDTITGSDCK WNVYRVCNTT SMEANAVANL LFSKYGKKWH FITPDYAFGH TLQKAAAADL QKLGGTITGN ELTPLGTTDF SAYLIKARAA NPDVLLVLPQ GSDMVNCLKQ IAQFGIGKQM HIAGLQQELE SLEAMPPEAR VGIWMFEWYW KQPGVPGVEQ FVADIRKVNN GKVPTARHWF GFTSVHTLAA VANREKTLDS RKLAEALGGF ALADDVKLQP NKCYYRKGDH QLMTSSFVGE ALSRPAGDPE D
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