| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05341 |
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| Symbol | RSp1296 |
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| ID | 1223608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1645637 |
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| End bp | 1646668 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637241159 |
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| Product | putative transmembrane protein |
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| Protein accession | NP_522855 |
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| Protein GI | 17549515 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCTTGT CCAGTTTCAT CAAGAAGCAG TTCATCGACA TCCTGCAATG GACCGAAAGC
GAAGACGGTG TGCTCGCCTG GCGCTATCCG ATGCAGGACA TGGAGATCCA GAACGGCGGA
AGCCTCACCG TGCGCGACTC GCAGATGGCG ATGTTCGTCA ACGAAGGCCA GATCGCCGAT
GTGTTCGGCG CCGGCATGTT CAAGCTCACC ACGCAGACGC TGCCGGTGCT CACCTACCTG
AAGAACTGGG ACAAGCTGTT CGAGTCCCCC TTCAAGTCGG ATGTCTACTT CTTCAGCACG
CGCCAGCAGC TCGGCCGCCG CTGGGGCACG CCGCAGCCGG TGACGGTGCG CGACAAGGAT
TTCGGCATGG TGCGCCTGCG CGCCTTCGGC GTGTATGCCT ACCACGTGAC CGATCCCAAG
CTGTTCTACC AGCAGGTCAG CGGCACGCGC GACGTCTACA CCGTCGATGA CATGGAGCAG
CAGCTGGGCC CCGTCATCAT GGGCGCCATG GCCACGGCCT TCGGCGAATC CGGCGTGCCG
TTCGTCGACC TGGCCGCCAA CCAGACGCTG CTGTCGAACA AGGTGCGCGA GGCGCTGCTG
CCGCAGTTCA CGCAGTACGG CCTGGCGCTC GACAGCTTCC AGGTCTCCAG CGTGACGCTG
CCCGACGAGC TGCAGGCCGC GCTGGACCGC CGCATCAGCA TGGACATGAC CGGCGACATG
CAGCGCTTCA CGCAATACCA GACCGCCGAA TCGCTGCCGC TGGCCGCGCG CAACGAAGGT
GGCATCGCCG GCACGGGTGC TGGCCTCGCG GCGGGCATGG TGATGGGCCA GACCATGGCC
GAGAGCCTGC GCACGTCTTT GCAGGGCAAC GCCGGCGCCG CGCCGGCCGC ACAGGCCGCT
CCGGCTGCCG ACGACCCGGC CGCGCGCCTG GCCAAGCTCA AGGAGCTGCT CGACAAGGGC
CTGATCACCC AGGCCGATTT CGATGCCGGC AAGGCGGCCG TGCTCAAGGC GCTGACCGGC
GGCGCGGGCT GA
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| Protein sequence | MSLSSFIKKQ FIDILQWTES EDGVLAWRYP MQDMEIQNGG SLTVRDSQMA MFVNEGQIAD
VFGAGMFKLT TQTLPVLTYL KNWDKLFESP FKSDVYFFST RQQLGRRWGT PQPVTVRDKD
FGMVRLRAFG VYAYHVTDPK LFYQQVSGTR DVYTVDDMEQ QLGPVIMGAM ATAFGESGVP
FVDLAANQTL LSNKVREALL PQFTQYGLAL DSFQVSSVTL PDELQAALDR RISMDMTGDM
QRFTQYQTAE SLPLAARNEG GIAGTGAGLA AGMVMGQTMA ESLRTSLQGN AGAAPAAQAA
PAADDPAARL AKLKELLDKG LITQADFDAG KAAVLKALTG GAG
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