Gene RS05338 details

Gene Information

• Locus tag: RS05338
• Symbol: RSp1293
• ID: 1223605
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: -
• Start bp: 1643508
• End bp: 1643930
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 637241156
• Product: putative transmembrane protein
• Protein accession: NP_522852
• Protein GI: 17549512
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1586] S-adenosylmethionine decarboxylase
• TIGRFAM ID: [TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACGCGCA CCGACATGGC CCCGGCCATG GCAGAAGGCG GCATGCCGCC GGTCGGCGAA 
CACCTGCTGC TGGATCTGTA CGGCGTGTCT CCCGCGCTGC TGCGTGATGC GGCGCTGCTC 
GAGTCCACGC TGCGCGAGGC CGCCGATGCG CTGGGCGCTA CCGTGCTGCA CGCGCATCTG 
CACCGCTTCG GCGCGCCCGG CGCCAACGCG CCGGCGGAGG CGGGCGGCGG CGTGACCGGC 
GTGCTGCTGC TGGCCGAATC CCATCTGTCC ATCCACACCT GGCCCGAGCA CGGGTTTGCC 
GCCATCGATG CGTTCATGTG CGGGACCGGC GCCACGCTCG CCGCGCGCGC CATCTTCGAG 
CGCGCGCTGG CGCCGTCGCG CGTGGACGTC CGCGTGACGC TGCGCGGGGG CCTGCCGGGC 
TAG 

 

Protein sequence

MTRTDMAPAM AEGGMPPVGE HLLLDLYGVS PALLRDAALL ESTLREAADA LGATVLHAHL 
HRFGAPGANA PAEAGGGVTG VLLLAESHLS IHTWPEHGFA AIDAFMCGTG ATLAARAIFE 
RALAPSRVDV RVTLRGGLPG