Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS05321 |
Symbol | RSp1276 |
ID | 1223588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1613931 |
End bp | 1616063 |
Gene Length | 2133 bp |
Protein Length | 710 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637241139 |
Product | ATP-dependent DNA helicase II protein |
Protein accession | NP_522835 |
Protein GI | 17549495 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.314896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCGCCG CCATCCCCAC CCCGGAAACC GCCCCCGCGC CCGACTACCT GGCGCAACTG AACGACCAGC AGCGCCTGGC CGTCGAGTTC GGCATTTCGG GGGCGGATGC GGCGCAGACA GGCCCGCTGC TGGTGCTGGC GGGCGCGGGC TCCGGCAAGA CGCATACGCT GGGCTGGCGA GTGGCGCACC TGGTGGCCAA TGGCGCCGAT CCGCAGCGCA TCCTGCTGCT GACGTTCTCG CGCCGGGCGG CGAGCGAGCT GTCCAGCCGC GCCGGCCACC TGCTGGCGCG CGCCCTGCAG GGCAGCGCCG GCGCGCGGTC GGCCGCCGGC ACCGCATACC GGACCGCGCT GCCCTGGGCC GGCACCTTCC ACGGCATCGG CGCGCGCCTG CTGCGCGAAT ACGCTGAGCG CATCGGCCTC GCGCCCGATT TCACCATCCA CGACCGCAGC GACGCGGCCG ACCTGCTCAA TGTCGTGCGG CATGAGTTGA ACCTGTCGAC CAAGGAACGC CGCTTCCCGC TCAAGCAGAC CTGCCTGGCC ATCTACTCGC GCGCCATCAA TGCCGAGAGC CCGCTGGATG CCGTGCTCAA GCAGCACTTC CCGTGGTGCG CGATGTGGCA GGCGCAGCTG CGCACGCTGT TCGACGCCTA CGTGGAGGCC AAGCAGGCCC AGCACATCCT CGACTACGAC GACCTGCTGC TGTACTGGCA CGCGATGGTG GCCGACGCCG GCCTGGCCGC CGAGATCGGC GCGCGCTTCG ACCACATCCT CGTCGACGAA TACCAGGACA CGAACCGGCT GCAGTCGTCG ATCCTGCGCG CGCTGCGGCC CGACGGGCGC GGCCTGACGG TGGTCGGCGA CGATGCGCAA TCCATCTACG CCTTCCGCGC GGCGACGGTG CGCAACATCC TCGACTTCCC GCGCCACTTC ACGCGGCCGG CGCACACGGT GCTGCTGGAG CGCAATTACC GCTCCACACA GCCGATCCTG GAGGCGTCCA ACGGCGTGAT GCGCTTTGCC ACCGAGCGCT TCGCCAAGAC GCTGTGGACC GACCGCGCAT CGACCCACCG CCCGCGCCTG ATCTCGGTGC GCGACGAGGC CGAGCAGGCG CGCTGCGTGG CCGAGCAGGT GCTGCGGCAT CGCGAGGGCG GGCTGGCGCT GAAGTCGCAG GCCGTGCTGT TCCGCACCGC CAGCCACAGC GCGCCGCTGG AGATCGAGCT CGCCCGCCGC AACATCCCCT TCGTCAAATA CGGCGGACTC AAATTCCTGG AGGCCGCGCA CGTCAAGGAC GTGCTGTCGG TGCTGCGCTG GGCCGAGAAT CCGCGCAACC GCATCGCCGG CTTCCGCGTC ATCCAGCTGC TGCCGGGCGC CGGCCCCGCC ACCGCCGCGC GCGTGCTCGA TACCATGGCC GAGGCGGCCG ACCCGGTCGC CGCGCTGCTG GCCCATGCGC CGCCGGCACG CCTGGCCGGC GACTGGGCGG CGCTGATGAC GCTGATGGCC ACGCTGCGCG CACCGAAGGA CAACGCAACC TGGGCCGGTG AACTGGAGGC CGTCGGCGCC TGGTACGCCC CCCACATGGA GCGCCTGCAC GACGATGCGG CCGTCCGCCA GGGCGATCTC GACCAGCTCG CCCGCATGGC CGCGACCTAC GCCTCGCGCG AGCGCTTCCT GACCGAGATG ACGCTCGACC CGCCCGAGCT GACCAGCGAT GAATCCGGCG AGCCGTACCG CGACGAGGAC TACCTGATCC TGTCGACCAT CCACTCCTCC AAGGGGCAGG AGTGGAAGGC CGTCTACCTG CTCAACGCCG TGGACGGCTG CATGCCCGCC GACCTGGGCG CCGGCTCGCA CGACGAGCTG GAGGAAGAGC GCCGGCTGCT CTACGTGGCC ATGACGCGCG CCCGCGACCA CCTCGACATC CTGGTGCCGC AGCGCTTCTA CATGACCCAG CAGACGCCCA ACGGCGACCG CCACCTCTAC GCATCGCGCA CGCGCTTCAT TCCGCCGGCG CTGCTGCCGC TGTTCGAGGC CTGCGCCTGG CCGCCGCCCG AGCCCGGCGC CGACCCGGCG GCCGAGGCAC GCGCGGCGGC CAAGGTCGAC CTGGCCAAGA AGATGCGCGG CTATTGGCGG TAG
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Protein sequence | MPAAIPTPET APAPDYLAQL NDQQRLAVEF GISGADAAQT GPLLVLAGAG SGKTHTLGWR VAHLVANGAD PQRILLLTFS RRAASELSSR AGHLLARALQ GSAGARSAAG TAYRTALPWA GTFHGIGARL LREYAERIGL APDFTIHDRS DAADLLNVVR HELNLSTKER RFPLKQTCLA IYSRAINAES PLDAVLKQHF PWCAMWQAQL RTLFDAYVEA KQAQHILDYD DLLLYWHAMV ADAGLAAEIG ARFDHILVDE YQDTNRLQSS ILRALRPDGR GLTVVGDDAQ SIYAFRAATV RNILDFPRHF TRPAHTVLLE RNYRSTQPIL EASNGVMRFA TERFAKTLWT DRASTHRPRL ISVRDEAEQA RCVAEQVLRH REGGLALKSQ AVLFRTASHS APLEIELARR NIPFVKYGGL KFLEAAHVKD VLSVLRWAEN PRNRIAGFRV IQLLPGAGPA TAARVLDTMA EAADPVAALL AHAPPARLAG DWAALMTLMA TLRAPKDNAT WAGELEAVGA WYAPHMERLH DDAAVRQGDL DQLARMAATY ASRERFLTEM TLDPPELTSD ESGEPYRDED YLILSTIHSS KGQEWKAVYL LNAVDGCMPA DLGAGSHDEL EEERRLLYVA MTRARDHLDI LVPQRFYMTQ QTPNGDRHLY ASRTRFIPPA LLPLFEACAW PPPEPGADPA AEARAAAKVD LAKKMRGYWR
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