| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05315 |
|---|
| Symbol | RSp1270 |
|---|
| ID | 1223582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 1606273 |
|---|
| End bp | 1607526 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637241133 |
|---|
| Product | putative signal peptide protein |
|---|
| Protein accession | NP_522829 |
|---|
| Protein GI | 17549489 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.639819 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.559524 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCATC CGATCTCCCG GCTGACGGCC GGACTGCTGC TGTCGCTGGC GGCGACGCTG
GCCGGCGCGC ACGCAGGCCA CGAGCATGGC GGCACCGCCG CGCAGGCGGC CAAGCCGCAG
CTCGCCACCA CCGCCGCGTT CGACCCGGCC GGCCGCCTGT GGGTGACCCG GGCCGAGGGC
CGGCACGTGG TGGTCGCGTG GTCCGACGAT CTGGGCATGA CATGGTCGGC GCCCCGGCGC
CTCAATCCGC AGCCCGAGCC CATCTACACC GACGGCGAGA ACCGTCCCAA GGTGCTCGCC
AGCCCCGACG GCGCGCTCTA CGTGACCTGG TCGCGCCCGC TGGAGGCGCC GTACACCGGG
TTTGTCCGCT TCTCGCGCTC GCTCGACGGC GGCCGGACCT GGAGCGCGCC CGCGACGGTC
CACCACGACC GGCAGCCGAT CACGCACCGC TTCGATTCCA TCGCGGTGGA CGGCGCTGGC
CGCCTCTTCA TCACCTGGAT CGACAAGCGC GATTTGCTGC GCGCGCAGGC GGCGGGGCAG
CCGTATGACG GGGCGGCGGT CTACTACACC GTCTCCACCG ATCGCGGCGC CACCTTCGCG
CCGGAGCGCA AGGTTGCCGA CCAGACCTGC GAGTGCTGCC GCATCGCGCT CGCGCCCGAT
GCGGATGGCC GCATGCTGGC CCTGTGGCGC AACGTCTTCG CCGGCCAGAT CCGCGATCAC
GCGCTGGCGG CGCTGCCCGT CGACGCAACG CCACCGACCA CCACGCGCGC CACCTTCTCC
GACTGGCGGG TCGAGGCCTG CCCCCATCAC GGCCCGGCGC TGGCCGTAAC GGCGGACGGC
ATGCGGCACA TGGCGTGGTT CTCCATGGCG CAGGGCAAGC CGGGGCTGTT CTACAGCCGC
CTGTCCGCCG ACGGCAAGCC GGTGGGCGGA GCCTGGGCGT TCACCGGCGC GGCGCAGGCC
GGCGCGCAGG CTTCGCATCC GGCGCTGCTG TCCGCGGACG GCGCGATCTG GCTGGCATGG
AAGCAGTTCG CCGATGACCG CATGCAGATC CTGCTGCGCA AGTCGACCGA CGGCGGAGCG
CACTGGAGCG CGCCCGCCAG CCTCGCGCGC ACCGACGGCG GCAGCGATCA TCCGCAGCTG
CTGGCGCGCG ATCGCCATGT CTACCTGTCA TGGCGCACGC AGGCCGAGGG CTACCGCCTC
ATCGACGTGA CCGATGCCGT GCCGCCCGAC GCCGCCCTGG AGGCCGCGCC ATGA
|
|---|
| Protein sequence | MMHPISRLTA GLLLSLAATL AGAHAGHEHG GTAAQAAKPQ LATTAAFDPA GRLWVTRAEG
RHVVVAWSDD LGMTWSAPRR LNPQPEPIYT DGENRPKVLA SPDGALYVTW SRPLEAPYTG
FVRFSRSLDG GRTWSAPATV HHDRQPITHR FDSIAVDGAG RLFITWIDKR DLLRAQAAGQ
PYDGAAVYYT VSTDRGATFA PERKVADQTC ECCRIALAPD ADGRMLALWR NVFAGQIRDH
ALAALPVDAT PPTTTRATFS DWRVEACPHH GPALAVTADG MRHMAWFSMA QGKPGLFYSR
LSADGKPVGG AWAFTGAAQA GAQASHPALL SADGAIWLAW KQFADDRMQI LLRKSTDGGA
HWSAPASLAR TDGGSDHPQL LARDRHVYLS WRTQAEGYRL IDVTDAVPPD AALEAAP
|
|---|
| |