Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS05315 |
Symbol | RSp1270 |
ID | 1223582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1606273 |
End bp | 1607526 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637241133 |
Product | putative signal peptide protein |
Protein accession | NP_522829 |
Protein GI | 17549489 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.639819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.559524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCATC CGATCTCCCG GCTGACGGCC GGACTGCTGC TGTCGCTGGC GGCGACGCTG GCCGGCGCGC ACGCAGGCCA CGAGCATGGC GGCACCGCCG CGCAGGCGGC CAAGCCGCAG CTCGCCACCA CCGCCGCGTT CGACCCGGCC GGCCGCCTGT GGGTGACCCG GGCCGAGGGC CGGCACGTGG TGGTCGCGTG GTCCGACGAT CTGGGCATGA CATGGTCGGC GCCCCGGCGC CTCAATCCGC AGCCCGAGCC CATCTACACC GACGGCGAGA ACCGTCCCAA GGTGCTCGCC AGCCCCGACG GCGCGCTCTA CGTGACCTGG TCGCGCCCGC TGGAGGCGCC GTACACCGGG TTTGTCCGCT TCTCGCGCTC GCTCGACGGC GGCCGGACCT GGAGCGCGCC CGCGACGGTC CACCACGACC GGCAGCCGAT CACGCACCGC TTCGATTCCA TCGCGGTGGA CGGCGCTGGC CGCCTCTTCA TCACCTGGAT CGACAAGCGC GATTTGCTGC GCGCGCAGGC GGCGGGGCAG CCGTATGACG GGGCGGCGGT CTACTACACC GTCTCCACCG ATCGCGGCGC CACCTTCGCG CCGGAGCGCA AGGTTGCCGA CCAGACCTGC GAGTGCTGCC GCATCGCGCT CGCGCCCGAT GCGGATGGCC GCATGCTGGC CCTGTGGCGC AACGTCTTCG CCGGCCAGAT CCGCGATCAC GCGCTGGCGG CGCTGCCCGT CGACGCAACG CCACCGACCA CCACGCGCGC CACCTTCTCC GACTGGCGGG TCGAGGCCTG CCCCCATCAC GGCCCGGCGC TGGCCGTAAC GGCGGACGGC ATGCGGCACA TGGCGTGGTT CTCCATGGCG CAGGGCAAGC CGGGGCTGTT CTACAGCCGC CTGTCCGCCG ACGGCAAGCC GGTGGGCGGA GCCTGGGCGT TCACCGGCGC GGCGCAGGCC GGCGCGCAGG CTTCGCATCC GGCGCTGCTG TCCGCGGACG GCGCGATCTG GCTGGCATGG AAGCAGTTCG CCGATGACCG CATGCAGATC CTGCTGCGCA AGTCGACCGA CGGCGGAGCG CACTGGAGCG CGCCCGCCAG CCTCGCGCGC ACCGACGGCG GCAGCGATCA TCCGCAGCTG CTGGCGCGCG ATCGCCATGT CTACCTGTCA TGGCGCACGC AGGCCGAGGG CTACCGCCTC ATCGACGTGA CCGATGCCGT GCCGCCCGAC GCCGCCCTGG AGGCCGCGCC ATGA
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Protein sequence | MMHPISRLTA GLLLSLAATL AGAHAGHEHG GTAAQAAKPQ LATTAAFDPA GRLWVTRAEG RHVVVAWSDD LGMTWSAPRR LNPQPEPIYT DGENRPKVLA SPDGALYVTW SRPLEAPYTG FVRFSRSLDG GRTWSAPATV HHDRQPITHR FDSIAVDGAG RLFITWIDKR DLLRAQAAGQ PYDGAAVYYT VSTDRGATFA PERKVADQTC ECCRIALAPD ADGRMLALWR NVFAGQIRDH ALAALPVDAT PPTTTRATFS DWRVEACPHH GPALAVTADG MRHMAWFSMA QGKPGLFYSR LSADGKPVGG AWAFTGAAQA GAQASHPALL SADGAIWLAW KQFADDRMQI LLRKSTDGGA HWSAPASLAR TDGGSDHPQL LARDRHVYLS WRTQAEGYRL IDVTDAVPPD AALEAAP
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