| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05214 |
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| Symbol | RSp0212 |
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| ID | 1222343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 260325 |
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| End bp | 261887 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637240071 |
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| Product | dioxygenase signal peptide protein |
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| Protein accession | NP_521773 |
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| Protein GI | 17548433 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGCC GGTCATTTCT CACCGCTGCC GGCCTGGGGC TGGCAGCGCC CTTTGGCCTG
ACGCCGCGCG ATGTCATGGC CATGGCAACG GAGTCGCCCG ACGCCTGGGC GTCCGGCTTT
GCCGCCGCGC GGGCCGAGCG CGCCTGGCTG GCCGGCTTCG AGGGCGTGTC CGCCGATCTG
CCGCCCAGCG CGCTCACGGT GGAGGGCCGC TTCCCGGCCG CGCTGCACGG TTCCCTGTAT
CGCAACGGAC CGGTGCGGCA CCAGATCGGC GGCCTGCGCT ATCACCACCT GTTCGACGGC
GACGGCATGA TCCAGCGCTA CGACATCGAC ACGCGCGGCG CGCGGACACG GGTCACGCAT
CGCGGCGTAT TCGTGCGCAC CGACAAGTTC GTCGCCGATA CCGCCGCGGG CCGGCCGGTG
CGCGGCACCT TCGCCACGCT GCTGCCGGGC ATGGTGCCGA TCGATTCGCC GGATGCGATC
AACGTCGCCA ACACCAGCGT GGTGATGCGC GGCGACGAGC TGCTGGCGCT GTGGGAGGGC
GGCTCGGCCA CGCGGCTCGA CCCGGACTCG CTGCGCACGC TGGGCGTCAA GACCTGGCGC
GCCGACTACG CCGGCATGCC GTTCTCCGCG CATCCCAAGG TGGAGGCGGA CGGCACGCTG
CGGAACTTCG GCGTGAGCAG CGCCGCGGGT CTGCTGACGG TGTATTGCGT GGGCGCGGAC
GGCGCGCTCA GGCGCGCCCA GTCGGTGCGC GTGCCGCAGA TGGCCATGGT GCATGACTTT
GCCGTGACGC AGCGGCACCT CGTCTTCCTG CTGCCGTCCT TCATCTACGA CGTGGAGCGC
GCGCGCGATG GCGCGTCGTT TCTCGACGCG CACGTGTGGC GGCCCGAGCT GGGCATGCGC
GCGCTGGTGC TCGACAAGAA CGACGCCGCG CGCATGCGCT GGTTCGAGCT GCCGGCGGGC
TTCGTCTTCC ATGTGGGCAA CGCGTGGTCG TCGCCGGACG GCCAGCGTAT CCACCTCGAC
TATGTGCGCT CGGACGATGC CGCGATCGTC ACCACCGCGC TGCGCGAGCT GATGCGCGGC
CACATCGTGC ATCCGGCCGC GCCGGCCAGG CTGACGCAGC TCACGCTCGA CCTGCGCTCG
GGCCGCGCCG GGCAGACCGC GACGCCCTAC GCGGCCGAGT TTCCCAAGAT CGACACGCGC
CGCACGGGAT TGCGCCATCG CGCGCTGTTC TGCGTGGCGA ATGCCGTGTC GCGGCCCGGG
GCGGACAGCC CGATCGGCTT CGATACGCTG ATGCGGTTCG ATACGGAATC CGGCCACGTG
CAGCGCTACC GCTTCGCGCA GCGCGCGCTG GTGGAGGAGC ACCTGTTCGT GCCGGCCGGG
CCGAACGCGC CGGAAGGCGA GGGCTGGCTG CTCGGCACGG TGTTCGACGT GGATGCGGGC
CGCACGCTGC TGACGGTGTT CGATGCGCGC AATGTGTCGG CGGGGCCGGT GGCCGTGGCC
GCGCGCGAGG GCGTGGTGCC GCAAGGCTTT CACGGGCTGT TCCGTTCCCG CATGGCAGCT
TGA
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| Protein sequence | MERRSFLTAA GLGLAAPFGL TPRDVMAMAT ESPDAWASGF AAARAERAWL AGFEGVSADL
PPSALTVEGR FPAALHGSLY RNGPVRHQIG GLRYHHLFDG DGMIQRYDID TRGARTRVTH
RGVFVRTDKF VADTAAGRPV RGTFATLLPG MVPIDSPDAI NVANTSVVMR GDELLALWEG
GSATRLDPDS LRTLGVKTWR ADYAGMPFSA HPKVEADGTL RNFGVSSAAG LLTVYCVGAD
GALRRAQSVR VPQMAMVHDF AVTQRHLVFL LPSFIYDVER ARDGASFLDA HVWRPELGMR
ALVLDKNDAA RMRWFELPAG FVFHVGNAWS SPDGQRIHLD YVRSDDAAIV TTALRELMRG
HIVHPAAPAR LTQLTLDLRS GRAGQTATPY AAEFPKIDTR RTGLRHRALF CVANAVSRPG
ADSPIGFDTL MRFDTESGHV QRYRFAQRAL VEEHLFVPAG PNAPEGEGWL LGTVFDVDAG
RTLLTVFDAR NVSAGPVAVA AREGVVPQGF HGLFRSRMAA
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