| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05187 |
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| Symbol | RSp0236 |
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| ID | 1222367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 296140 |
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| End bp | 298464 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637240095 |
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| Product | putative 4-alpha-glucanotransferase (amylomaltase) protein |
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| Protein accession | NP_521797 |
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| Protein GI | 17548457 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAC GCCCCGCGCC CCCCTCGTCC CCGCATGCCG CCAGCGCGCT GCACCGGCTG
GCGCTGGACG CCGGCCTGCT GGTCGACTGG GAAGACGCCG CCGGCCGCCC GATGCGCGTG
AGCGACGACG TGCTGCGCGC CGTGCTGCGC TGCCTGGGCC TGCCCGCCGA CAGCGCCGCC
GACGAGGCCG ACAGCCGGGG CAGGCTGCTG GCCGAAGCGG CCGAGCACGC GGTGCCGCCG
CTGGTCACCG GGGTGGCCGG ACACGCCGTC CTGCTGGAAA CCGCGCCACC GTGGGCGGCC
ACGCTCGGCG GACGGCCCTA CCGGATCGGC TTCGAGCACG GCGGCGGCGC CGAAGGCACG
GTGCACGCGA GCATCGGGCA CGACCGGGCC ACGCTGCGGC TGGCGCCGGT GCCAGCGCCG
GGCTACCACC GGCTGCGCAT CGACACCGGC AGCCGCACCG CCATCGAGAC CACGCTGGCC
ATCGCGCCGG CGCGCTGCTA CGCGGTGTCC GATGCGCTGC AGGCGCGCGG GCGCCCGCCC
GATGCGCGGC TGTGGGGCGG CTCCGCGCAG CTCTACGGCC TGCGCCACGA CGGCGAGCGG
GCCGCGCTCT CGGCGGGGCT GGGCGACTAC ACCGCGGCCG GCCTGCTGGC GCGCAGCCTG
GCGCGGCACG GCGCCGACGC GCTGGCACTG AGCCCCGTGC ACGCCATGTT CAGTGCGGAC
ACGCATCGCT ACGCCCCTTA CTCGCCATCG AGCCGGCTGT TCCTCAACGC ATGGATGATC
GACCCGGCCG CGCTGCTCGG CGCCGAGGCC GCGCGGCAGG CGGTGAGCGA CGCCGGCCTG
GCGGACGACT GCGCCCGGCT GGAGGCGAAT GCCCTGATCG ACTGGCCCGC CAGCGCCGCC
GCGCGGCTGA CGGTGCTGCG CGCGCTGCAT CGCCGTCTGC GGATGCAGGC CACCGCCGGA
GACAGCGCCG CGCGCCGCCG GCACGAAGAC ATGCTCGCCC ACTGCGCCGG CCAGGGCGGC
AGCCTGCTCG ACCACGCGCA CTTCGAGGCG CTCGACACCC ACCTGCGCCA GGCGCATCCG
CCGCTGCACC ACTGGCAGCA CTGGCCCGCG CCCTACCGGT CGCCGTCGTA CCTGGCGGTG
CGCGCCTTCG CCCGCGACCA CCCCGACGCC GTGGATTTCC ACCGCTTCCT GCAATGGGCG
GCGGCGCGCC AACTGGCCGC CGCGCAGCGC GCCGCCGAAG ACGCCGGCAT GGCCATCGGC
CTGATCGCCG ACCTCGCGGT CGGCACCGAC GGCGCCGGCA GCCATGCGTG GAGCCGGCAG
CAGGACCTGC TGATCGGCCT GACGGTGGGC GCGCCGCCGG ACGTGTTCAA CGCGCAGGGA
CAAAGCTGGG GGCTCACCAC CTTCAGCCCG CGCGCGATGC GCACGCAGGG CTTCGCCGCT
TTCCTCGAGA TGCTGCGGGC CGTGATGGCC GTGCCCGGCG GCGTGCGCAT CGACCATGTG
CTGGGGCTGA TGCGGCTGTG GGTGATTCCC GACGGCGCGC GGGCGCTGGA CGGCGTGTAC
CTGCGGTATC CGCTGCGCGA CCTGCTGCGG CTGATCGCAC TGGAGTCGTG GCGCAACCGC
TGCATCGTCA TCGGCGAAGA TCTCGGCACC GTGCCGGCGG GCCTGCGCGA ACAGCTGGCC
GACGCGGGCC TGCTCGGCAT GCGCATCCTG TGGTTCGAGC GCGACTATGC GCGACCCGAG
GCGCCGTTCC GCCCGCCGCA AGCGTGGTCG CCCGCCTCGG TGGCCATGAC CAGCACGCAC
GACCTGCCCA CCGTGGCAGG CTGGTGGACG GGCCACGACC TGCACTGGCA AGCCCGGCTG
GGGCTGCTGC CGATCGGCAT GAACGAAACC GACGCGCGCA CGCACCGCAT GGCGGACCGG
CGCGCACTGG TCGGCGCCTT CGCGCAACAC CATCGCACCA CCGTGCCCAC GGCCGGCGAC
GACGCGGCAC AGCGCATCGC CGCCCTGCAG ACCGCGCTCG CGCAGGCACG CACCGCTCCC
CCCGCGCAAG TGGACACCCT GCTGGCCGCC ACCGCGGGCG ATTTCGCCAC CGCCGCCCTC
GCCTACGCGG CGGCCGCGCC GGTGCCGTTG GCGATCGCCC CGATGGAAGA CCTGCTCGGC
CTGCTGGAGC AGCCCAACCT GCCCAGCACC ATCGAGACGC ATCCCAACTG GCGCCGCCGC
CTGTCCGCGC CCGCAGCCGG GCTGCTGGCG GCCCCCGCCA TCCGGGCGCG GCTGGCGGCC
CTGGCGCGTT CGCGCGCGAA CGCCGCCCCG GATTCCCCGC CATGA
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| Protein sequence | MSQRPAPPSS PHAASALHRL ALDAGLLVDW EDAAGRPMRV SDDVLRAVLR CLGLPADSAA
DEADSRGRLL AEAAEHAVPP LVTGVAGHAV LLETAPPWAA TLGGRPYRIG FEHGGGAEGT
VHASIGHDRA TLRLAPVPAP GYHRLRIDTG SRTAIETTLA IAPARCYAVS DALQARGRPP
DARLWGGSAQ LYGLRHDGER AALSAGLGDY TAAGLLARSL ARHGADALAL SPVHAMFSAD
THRYAPYSPS SRLFLNAWMI DPAALLGAEA ARQAVSDAGL ADDCARLEAN ALIDWPASAA
ARLTVLRALH RRLRMQATAG DSAARRRHED MLAHCAGQGG SLLDHAHFEA LDTHLRQAHP
PLHHWQHWPA PYRSPSYLAV RAFARDHPDA VDFHRFLQWA AARQLAAAQR AAEDAGMAIG
LIADLAVGTD GAGSHAWSRQ QDLLIGLTVG APPDVFNAQG QSWGLTTFSP RAMRTQGFAA
FLEMLRAVMA VPGGVRIDHV LGLMRLWVIP DGARALDGVY LRYPLRDLLR LIALESWRNR
CIVIGEDLGT VPAGLREQLA DAGLLGMRIL WFERDYARPE APFRPPQAWS PASVAMTSTH
DLPTVAGWWT GHDLHWQARL GLLPIGMNET DARTHRMADR RALVGAFAQH HRTTVPTAGD
DAAQRIAALQ TALAQARTAP PAQVDTLLAA TAGDFATAAL AYAAAAPVPL AIAPMEDLLG
LLEQPNLPST IETHPNWRRR LSAPAAGLLA APAIRARLAA LARSRANAAP DSPP
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