Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS05183 |
Symbol | RSp0240 |
ID | 1222371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 305507 |
End bp | 308989 |
Gene Length | 3483 bp |
Protein Length | 1160 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637240099 |
Product | hypothetical protein |
Protein accession | NP_521801 |
Protein GI | 17548461 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases [COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
TIGRFAM ID | [TIGR02456] trehalose synthase [TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0584538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.396388 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGCA ACCCGACCGT GCTGCTGGTG GACGACGCGC TCTGGTACAA GGACGCGGTC ATCTATCAGC TGCACGTCAA ATCGTTCTGC GACTCGGACA ACGACGGCGT AGGGGACTTC CCGGGCCTGA TCTCCAAGCT CGACTACATC GCCGAGCTGG GCGTGGATGC GATCTGGCTG CTGCCGTTCT ACCCCTCGCC GCGCCGCGAC GACGGCTACG ACATCGCCGA ATACCGCGGC GTGCACCCCG ACTACGGCAC CATGGCCGAC GCGCGCCGCT TCATTGCCGA GGCGCACGCG CGCGGCCTGC GCGTCATTAC CGAGCTGGTC ATCAACCACA CCTCGGACCA GCACCCGTGG TTCCAGCGCG CGCGGCGCGC CAAGGCGGGC TCCGCGCTGC GCGACTTCTA CGTGTGGTCG GACCACGACA AGAAATACGC CGGCACGCGC ATCATCTTCA TCGACACCGA GCCCTCCAAC TGGACCTGGG ACCCGGTGGC CGACGCCTAC TACTGGCACC GCTTCTATTC GCACCAGCCC GACCTGAACT TCGACAACCC GCGCGTGCTC AAGGCCGTGC TGGGCGTGAT GAAGTTCTGG CTCAACCTGG GCGTGGACGG CCTGCGGCTC GATGCCGTGC CCTACCTGGT GGAGCGCGAG GGCACCGCCA ACGAGAACCT GCCCGAGACG CACGCCGTGC TGCGCAAGAT CCGCGCGGCG ATGGACGCGG AATTCAAGAA CCGCCTGCTG CTGGCCGAAG CCAACCAGTG GCCCGAAGAC ACACAGGAAT ACTTCGGCAA CGGCGACGAG TGCCACATGG CCTTCCACTT TCCGCTGATG CCGCGCATGT ACATGGCGAT CGCGCGGGAG GACCGCTTCC CGATCACCGA CATCATGCGG CAGACGCCCG AGGTGCCGCC CACCTGCCAG TGGGCCATCT TCCTGCGCAA CCACGACGAG CTGACGCTGG AGATGGTGAC CGACGCGGAG CGCGACTACC TGTGGGAGGT CTACGCCAGC GACCGCCGCG CGCGGCTCAA TCTCGGCATC CGCCGGCGCC TGGCGCCGCT GCTGGAGCGC GACCGCCGCC GCGTGGAGCT GATGAACAGC CTGCTGTTCT CGATGCCCGG CACGCCGGTG ATGTATTACG GCGACGAGAT CGGCATGGGC GACAACATCC ACCTGGGCGA CCGCGACGGC GTGCGCACGC CGATGCAGTG GTCGCCCGAC CGCAACGGCG GCTTCTCGCG CGCCGATCCG GAGCAGCTGG TGCTGCCGGC CATCATGGGC TCGCTGTACG GCTATGAATC GGTCAACGTG GAGGCGCAGA CGCGCGACGC GCATTCGCTG CTGAACTGGA CGCGCCGGCT GCTGGCCACG CGCAAGCGCC ACCGCGTGTT CGGGCGCGGC AGCATCCAGT TCCTGCAGCC GGCCAACCGC AAGGTGCTGG CCTATGCGCG CGCGCTGGAA GGCGAGGCCC CCATCCTGTG CGTGGCGAAT CTGTCCCGGG CCTCGCAGGC GGTGGAGCTG GACCTGGCCG CCTATGCGCA GCGCGTGCCG GTGGAGTTGA TCGGCGGGAC GGCCTTCCCG CCGATCGGCC AGTTGCCCTA TCTGCTGACG CTGCCGCCCT ATGCGTTCTA CTGGCTGGAG CTGCGCGAGA ACGAGCCCGG CCCGTCGTGG GCGCAGCCGG CCGCGGAGCA GTTGCCCGAG TTCACCACGC TGGTGCTGCG CGCGGGGCTC GATGCGCTGG CCGACACACG CCAGCGCGAG GCGCACCGCC AGCTGGTCGA GCGCGAGATC CTGCCGACCT ACCTGCCCAA GCGCCGCTGG TTCGCGGCCA AGGACAGCGT GCTGCGCGGC GCGCACTTCG CCTGGGGCAC CGAGCTGCCG GTGGATGCGG CCTCCACCAA CCGGCCGCTG GCGGGGGCGA CCCGGCCCGA GGTGTTCATC AACGAGATCG CCGTCACGCT GGGCGACGCG GACGGCACCG AGCGCACCGA GCGCTACCTG CTGCCGCTGT CGATCGCGTG GGAGAGCGCC ACGCTGCCCG CGCTGCCGAT CCAGCTGGCG CTGGCGCGCG TGCGGCGCGG CCGCCATGTC GGCTACCTGA CCGATGCCTT CACCACCGAG ACCTTCGCCC GTGTGCTGCT GGCCAACCTG GTGCGCGGCG TCACGCTGGA GGCCAGCGAC GGCCGCGTGC ATTTCGAGCC CGAGCCGCAC CTGGCCGAAC TGGCCGAGCC GCCGGTGGCC GCCGAAACCG CGGCGGTGCG CCCGGCGCCG CTGCCGCTGG CGCCCGACGC GCCGGTGCAG TGGCTGGCGG CGGAGCAGTC CAACAGCTCG CTGGTGATCG GCGAATCGGT CATCGTCAAG CTGATCCGCC GGGTGGCGGC GGGTGTGCAT CCGGAAGTGG AGATGACGCG CCACCTCACG CGCATCGGCT ATGCCAACAC GGCCGCGCTG ATCGGCGAGA TCGCGCACGA GGGCGCGGAC GGCGAGCGCA GCACGCTGGC CGTGCTCCAG AGCTTCGTGC CCAACCAGGG CGATGCGTGG ACATGGGCAC TCGACTACCT GCGCCGCACC ATTGATGAGC TGGCGGTGCT GACGGAGGCC GTCTCGGCCG GCGACGGCGA CGCGGCGCCC ACCGCCGTCT CGGAAGCGCG CACCGATACC GACGAAGCGC TGGCGGGCTA CCTGGCCTTC ATCGGCGCGA TCGGCACGCG GCTAGGCGAG CTGCACGTCG CGCTGGCCGG GCCGTCGGAC GATCCGGCCT TCGGCACCCG CGCCGCCGAC GCCGACGACG CAGCCTTCTG GACCGCGCGC GTGGACGAGG AGCTGGCCCG CGCGCTCGAC CACCTCGCGG CATGGCAGGC GGCCAACGGA CCGCGCGCCG AGGTCGGCTG GCTGCTGTCG CAGCGCGATG CCCTGCTGGA AGCCGCCCGC GAACGCGCAC AGGGCGGCCT GGGCGCGATG CTGGCGCGCG TCCACGGCGA CTTCCACCTC GGCCAGGTGC TGGTGGCGCA GGGCGATGCC TACCTGATCG ACTTCGAGGG CGAGCCGTCG CGGCCGGTGG ACGAGCGCCG GCGCAAGACC AGCCCGCTGC GCGACGTGGC CGGGCTGGTG CGCTCGCTCG ACTACGTGGT GGGCGCCATG CGGCAGGGCC CCGAGCATGT GGCCGGACCG GCGCAGGAGC GGCGCGACCA GCTGCTCGAA CGCTTCCGCA ATGCGTCCAC CGAGCGCTTC CTGGAGGCCT ACGCGGCCGC CATCCTGGCC TCCGGTTCCG ATGACGGCGC CTGCATGCTC GATCTGGACC TGCTCGACCT GTTCCTGTTG GAGAAGGCGG CCTACGAGGT CAACTACGAA GCGGCCAACC GGCCGACGTG GCTGCCGATC CCGCTGGCGG GCCTGGCGCG GGTGGCGCGC CGGCTGCTGC CAGCGGACGT GGCACCGCCC GTGGCGCGGG ATCCGCTCGG AGGCCCGCCG TGA
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Protein sequence | MTRNPTVLLV DDALWYKDAV IYQLHVKSFC DSDNDGVGDF PGLISKLDYI AELGVDAIWL LPFYPSPRRD DGYDIAEYRG VHPDYGTMAD ARRFIAEAHA RGLRVITELV INHTSDQHPW FQRARRAKAG SALRDFYVWS DHDKKYAGTR IIFIDTEPSN WTWDPVADAY YWHRFYSHQP DLNFDNPRVL KAVLGVMKFW LNLGVDGLRL DAVPYLVERE GTANENLPET HAVLRKIRAA MDAEFKNRLL LAEANQWPED TQEYFGNGDE CHMAFHFPLM PRMYMAIARE DRFPITDIMR QTPEVPPTCQ WAIFLRNHDE LTLEMVTDAE RDYLWEVYAS DRRARLNLGI RRRLAPLLER DRRRVELMNS LLFSMPGTPV MYYGDEIGMG DNIHLGDRDG VRTPMQWSPD RNGGFSRADP EQLVLPAIMG SLYGYESVNV EAQTRDAHSL LNWTRRLLAT RKRHRVFGRG SIQFLQPANR KVLAYARALE GEAPILCVAN LSRASQAVEL DLAAYAQRVP VELIGGTAFP PIGQLPYLLT LPPYAFYWLE LRENEPGPSW AQPAAEQLPE FTTLVLRAGL DALADTRQRE AHRQLVEREI LPTYLPKRRW FAAKDSVLRG AHFAWGTELP VDAASTNRPL AGATRPEVFI NEIAVTLGDA DGTERTERYL LPLSIAWESA TLPALPIQLA LARVRRGRHV GYLTDAFTTE TFARVLLANL VRGVTLEASD GRVHFEPEPH LAELAEPPVA AETAAVRPAP LPLAPDAPVQ WLAAEQSNSS LVIGESVIVK LIRRVAAGVH PEVEMTRHLT RIGYANTAAL IGEIAHEGAD GERSTLAVLQ SFVPNQGDAW TWALDYLRRT IDELAVLTEA VSAGDGDAAP TAVSEARTDT DEALAGYLAF IGAIGTRLGE LHVALAGPSD DPAFGTRAAD ADDAAFWTAR VDEELARALD HLAAWQAANG PRAEVGWLLS QRDALLEAAR ERAQGGLGAM LARVHGDFHL GQVLVAQGDA YLIDFEGEPS RPVDERRRKT SPLRDVAGLV RSLDYVVGAM RQGPEHVAGP AQERRDQLLE RFRNASTERF LEAYAAAILA SGSDDGACML DLDLLDLFLL EKAAYEVNYE AANRPTWLPI PLAGLARVAR RLLPADVAPP VARDPLGGPP
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