Gene RS05183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS05183 
SymbolRSp0240 
ID1222371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp305507 
End bp308989 
Gene Length3483 bp 
Protein Length1160 aa 
Translation table11 
GC content71% 
IMG OID637240099 
Producthypothetical protein 
Protein accessionNP_521801 
Protein GI17548461 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis 
TIGRFAM ID[TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0584538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.396388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCA ACCCGACCGT GCTGCTGGTG GACGACGCGC TCTGGTACAA GGACGCGGTC 
ATCTATCAGC TGCACGTCAA ATCGTTCTGC GACTCGGACA ACGACGGCGT AGGGGACTTC
CCGGGCCTGA TCTCCAAGCT CGACTACATC GCCGAGCTGG GCGTGGATGC GATCTGGCTG
CTGCCGTTCT ACCCCTCGCC GCGCCGCGAC GACGGCTACG ACATCGCCGA ATACCGCGGC
GTGCACCCCG ACTACGGCAC CATGGCCGAC GCGCGCCGCT TCATTGCCGA GGCGCACGCG
CGCGGCCTGC GCGTCATTAC CGAGCTGGTC ATCAACCACA CCTCGGACCA GCACCCGTGG
TTCCAGCGCG CGCGGCGCGC CAAGGCGGGC TCCGCGCTGC GCGACTTCTA CGTGTGGTCG
GACCACGACA AGAAATACGC CGGCACGCGC ATCATCTTCA TCGACACCGA GCCCTCCAAC
TGGACCTGGG ACCCGGTGGC CGACGCCTAC TACTGGCACC GCTTCTATTC GCACCAGCCC
GACCTGAACT TCGACAACCC GCGCGTGCTC AAGGCCGTGC TGGGCGTGAT GAAGTTCTGG
CTCAACCTGG GCGTGGACGG CCTGCGGCTC GATGCCGTGC CCTACCTGGT GGAGCGCGAG
GGCACCGCCA ACGAGAACCT GCCCGAGACG CACGCCGTGC TGCGCAAGAT CCGCGCGGCG
ATGGACGCGG AATTCAAGAA CCGCCTGCTG CTGGCCGAAG CCAACCAGTG GCCCGAAGAC
ACACAGGAAT ACTTCGGCAA CGGCGACGAG TGCCACATGG CCTTCCACTT TCCGCTGATG
CCGCGCATGT ACATGGCGAT CGCGCGGGAG GACCGCTTCC CGATCACCGA CATCATGCGG
CAGACGCCCG AGGTGCCGCC CACCTGCCAG TGGGCCATCT TCCTGCGCAA CCACGACGAG
CTGACGCTGG AGATGGTGAC CGACGCGGAG CGCGACTACC TGTGGGAGGT CTACGCCAGC
GACCGCCGCG CGCGGCTCAA TCTCGGCATC CGCCGGCGCC TGGCGCCGCT GCTGGAGCGC
GACCGCCGCC GCGTGGAGCT GATGAACAGC CTGCTGTTCT CGATGCCCGG CACGCCGGTG
ATGTATTACG GCGACGAGAT CGGCATGGGC GACAACATCC ACCTGGGCGA CCGCGACGGC
GTGCGCACGC CGATGCAGTG GTCGCCCGAC CGCAACGGCG GCTTCTCGCG CGCCGATCCG
GAGCAGCTGG TGCTGCCGGC CATCATGGGC TCGCTGTACG GCTATGAATC GGTCAACGTG
GAGGCGCAGA CGCGCGACGC GCATTCGCTG CTGAACTGGA CGCGCCGGCT GCTGGCCACG
CGCAAGCGCC ACCGCGTGTT CGGGCGCGGC AGCATCCAGT TCCTGCAGCC GGCCAACCGC
AAGGTGCTGG CCTATGCGCG CGCGCTGGAA GGCGAGGCCC CCATCCTGTG CGTGGCGAAT
CTGTCCCGGG CCTCGCAGGC GGTGGAGCTG GACCTGGCCG CCTATGCGCA GCGCGTGCCG
GTGGAGTTGA TCGGCGGGAC GGCCTTCCCG CCGATCGGCC AGTTGCCCTA TCTGCTGACG
CTGCCGCCCT ATGCGTTCTA CTGGCTGGAG CTGCGCGAGA ACGAGCCCGG CCCGTCGTGG
GCGCAGCCGG CCGCGGAGCA GTTGCCCGAG TTCACCACGC TGGTGCTGCG CGCGGGGCTC
GATGCGCTGG CCGACACACG CCAGCGCGAG GCGCACCGCC AGCTGGTCGA GCGCGAGATC
CTGCCGACCT ACCTGCCCAA GCGCCGCTGG TTCGCGGCCA AGGACAGCGT GCTGCGCGGC
GCGCACTTCG CCTGGGGCAC CGAGCTGCCG GTGGATGCGG CCTCCACCAA CCGGCCGCTG
GCGGGGGCGA CCCGGCCCGA GGTGTTCATC AACGAGATCG CCGTCACGCT GGGCGACGCG
GACGGCACCG AGCGCACCGA GCGCTACCTG CTGCCGCTGT CGATCGCGTG GGAGAGCGCC
ACGCTGCCCG CGCTGCCGAT CCAGCTGGCG CTGGCGCGCG TGCGGCGCGG CCGCCATGTC
GGCTACCTGA CCGATGCCTT CACCACCGAG ACCTTCGCCC GTGTGCTGCT GGCCAACCTG
GTGCGCGGCG TCACGCTGGA GGCCAGCGAC GGCCGCGTGC ATTTCGAGCC CGAGCCGCAC
CTGGCCGAAC TGGCCGAGCC GCCGGTGGCC GCCGAAACCG CGGCGGTGCG CCCGGCGCCG
CTGCCGCTGG CGCCCGACGC GCCGGTGCAG TGGCTGGCGG CGGAGCAGTC CAACAGCTCG
CTGGTGATCG GCGAATCGGT CATCGTCAAG CTGATCCGCC GGGTGGCGGC GGGTGTGCAT
CCGGAAGTGG AGATGACGCG CCACCTCACG CGCATCGGCT ATGCCAACAC GGCCGCGCTG
ATCGGCGAGA TCGCGCACGA GGGCGCGGAC GGCGAGCGCA GCACGCTGGC CGTGCTCCAG
AGCTTCGTGC CCAACCAGGG CGATGCGTGG ACATGGGCAC TCGACTACCT GCGCCGCACC
ATTGATGAGC TGGCGGTGCT GACGGAGGCC GTCTCGGCCG GCGACGGCGA CGCGGCGCCC
ACCGCCGTCT CGGAAGCGCG CACCGATACC GACGAAGCGC TGGCGGGCTA CCTGGCCTTC
ATCGGCGCGA TCGGCACGCG GCTAGGCGAG CTGCACGTCG CGCTGGCCGG GCCGTCGGAC
GATCCGGCCT TCGGCACCCG CGCCGCCGAC GCCGACGACG CAGCCTTCTG GACCGCGCGC
GTGGACGAGG AGCTGGCCCG CGCGCTCGAC CACCTCGCGG CATGGCAGGC GGCCAACGGA
CCGCGCGCCG AGGTCGGCTG GCTGCTGTCG CAGCGCGATG CCCTGCTGGA AGCCGCCCGC
GAACGCGCAC AGGGCGGCCT GGGCGCGATG CTGGCGCGCG TCCACGGCGA CTTCCACCTC
GGCCAGGTGC TGGTGGCGCA GGGCGATGCC TACCTGATCG ACTTCGAGGG CGAGCCGTCG
CGGCCGGTGG ACGAGCGCCG GCGCAAGACC AGCCCGCTGC GCGACGTGGC CGGGCTGGTG
CGCTCGCTCG ACTACGTGGT GGGCGCCATG CGGCAGGGCC CCGAGCATGT GGCCGGACCG
GCGCAGGAGC GGCGCGACCA GCTGCTCGAA CGCTTCCGCA ATGCGTCCAC CGAGCGCTTC
CTGGAGGCCT ACGCGGCCGC CATCCTGGCC TCCGGTTCCG ATGACGGCGC CTGCATGCTC
GATCTGGACC TGCTCGACCT GTTCCTGTTG GAGAAGGCGG CCTACGAGGT CAACTACGAA
GCGGCCAACC GGCCGACGTG GCTGCCGATC CCGCTGGCGG GCCTGGCGCG GGTGGCGCGC
CGGCTGCTGC CAGCGGACGT GGCACCGCCC GTGGCGCGGG ATCCGCTCGG AGGCCCGCCG
TGA
 
Protein sequence
MTRNPTVLLV DDALWYKDAV IYQLHVKSFC DSDNDGVGDF PGLISKLDYI AELGVDAIWL 
LPFYPSPRRD DGYDIAEYRG VHPDYGTMAD ARRFIAEAHA RGLRVITELV INHTSDQHPW
FQRARRAKAG SALRDFYVWS DHDKKYAGTR IIFIDTEPSN WTWDPVADAY YWHRFYSHQP
DLNFDNPRVL KAVLGVMKFW LNLGVDGLRL DAVPYLVERE GTANENLPET HAVLRKIRAA
MDAEFKNRLL LAEANQWPED TQEYFGNGDE CHMAFHFPLM PRMYMAIARE DRFPITDIMR
QTPEVPPTCQ WAIFLRNHDE LTLEMVTDAE RDYLWEVYAS DRRARLNLGI RRRLAPLLER
DRRRVELMNS LLFSMPGTPV MYYGDEIGMG DNIHLGDRDG VRTPMQWSPD RNGGFSRADP
EQLVLPAIMG SLYGYESVNV EAQTRDAHSL LNWTRRLLAT RKRHRVFGRG SIQFLQPANR
KVLAYARALE GEAPILCVAN LSRASQAVEL DLAAYAQRVP VELIGGTAFP PIGQLPYLLT
LPPYAFYWLE LRENEPGPSW AQPAAEQLPE FTTLVLRAGL DALADTRQRE AHRQLVEREI
LPTYLPKRRW FAAKDSVLRG AHFAWGTELP VDAASTNRPL AGATRPEVFI NEIAVTLGDA
DGTERTERYL LPLSIAWESA TLPALPIQLA LARVRRGRHV GYLTDAFTTE TFARVLLANL
VRGVTLEASD GRVHFEPEPH LAELAEPPVA AETAAVRPAP LPLAPDAPVQ WLAAEQSNSS
LVIGESVIVK LIRRVAAGVH PEVEMTRHLT RIGYANTAAL IGEIAHEGAD GERSTLAVLQ
SFVPNQGDAW TWALDYLRRT IDELAVLTEA VSAGDGDAAP TAVSEARTDT DEALAGYLAF
IGAIGTRLGE LHVALAGPSD DPAFGTRAAD ADDAAFWTAR VDEELARALD HLAAWQAANG
PRAEVGWLLS QRDALLEAAR ERAQGGLGAM LARVHGDFHL GQVLVAQGDA YLIDFEGEPS
RPVDERRRKT SPLRDVAGLV RSLDYVVGAM RQGPEHVAGP AQERRDQLLE RFRNASTERF
LEAYAAAILA SGSDDGACML DLDLLDLFLL EKAAYEVNYE AANRPTWLPI PLAGLARVAR
RLLPADVAPP VARDPLGGPP