| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05072 |
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| Symbol | RSp1182 |
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| ID | 1223494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1502255 |
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| End bp | 1504474 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637241047 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | NP_522743 |
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| Protein GI | 17549403 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.59067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.262712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACC CCGCCCGCCT CGACGCAGCC CCGGTGCCGG CCGACGACGA TACCGGCGCG
CGCGAAGCCG GCCGCTGGGT CGAGCCCCTG CTGCTGGCCG CGCGCCACCT CGGGCTGTCG
GTCTCGCCCG AGCTCGTGCG CAGCGCCGCC ACCTGGTCGA AGCACGCCGA GCCCGACGCC
GCCATCGTTG ACCTGGCCGC GTCCGCCGGC CTCACCGCGC AGTTCGTCGA GCTGCCCGTG
GCGCAGCTCT CCCCGGTGAT GCTGCCGGCG CTGGTGCCGA TCGACGGCCG GCACATCGGC
GTGGCGGTGG CGGTGGCGGG CGGGCGGTTG ACGGTGCTGC TCGCCATCGA CGGCAAGACC
GTCGAGCGCG CGCTCCCGCT CGACGGCCCC GGGCACGGCA CGCCGTCCCG CATCCTGCTG
GTGCACGAGC ACACGGTGCG GCGCGATGGC CGGCTCGACG CCTACCTGGC GGCCCGGCCC
AACACCTGGC TGCAGGATCT CTTCACGGGC CATTGGCCGC TGCTGCTCGA ACTGGGCGCG
GGCTCGCTGT TCGGCAACCT GCTGGCGGTC GGCACCTCGC TGTTCGCGAT GCAGGTGTGG
GACCGCGTGG TGCCCGCGCG CTCCACGCAC ACGCTGTGGG TGCTCGCCTC GGGCGTGGCG
CTCGCGCTGC TGCTCGAACT GCTGCTGCGG ACCGCGCGCG TGGCGATCGC CGACCACTTC
GGCAAGGCGG CCGACCTCAA GCTCTCGGCG ATGTTCTTCG CGCGCGTGCT CGACATCCGC
AACGACGCGC GGCCCCGGTC GCCCGGCACG CTGATCGCCC AGCTGCGCGA TCTCGAACAG
CTGCGCGAGC TGCTGACCTC GAGCACGCTG GGCGTGCTGA TCGACCTGCC GTTCGTGGCG
GCCTTCCTGT GCATCATCTG GCTGCTGGGC GGGCCGCTCG CCTTTGTGCC GCTGGCCGCG
ATTCCGCTGC TGATCATGCC GGGCGTGCTC GCGCAGATTC CGCTGGCGAA GCTGTCGAAC
GCGGGCTTGG CCGAGGCCGC GGTGCGCAAT GCCATCCTGA TGGAGTCGAT CTACCGGGTC
GAAGACATCA AGACGCTGCA GGCCGAACCG CGCTTCCGCC ACCTGTGGAA CCACACCAAC
CGCGTCAACG CCGACATCGG CCTGAAGCAG CGCCATCTCG GCGGGCTGCT GGTCAACCTC
GCGTCGACGG TGCAGCAGTT CGCCTATGTC GGCGTGCTGG TCACCGGCGT CTACGGCATG
CTCGATGCCA GCCTGTCGTT CGGCGCGGTG CTGGCCTGCT CGATCCTCAC CAGCCGCACC
ATCGCGCCGC TCGGCCAGAT TCCCGCCGTG CTCGCGCGGG TACAGAACGT GCGGGTCGGC
AAGAAGGGGC TGGACAGCCT GCTCTCGCTG CCGGTCGACC ACGACCCCGC GAAGGACGCT
TACCACAAGC CCGCGCTGAT CGGCCGGTAT CGCTTCGACA ACGTGGCCTA CGGCTTCGAC
CCCGAGGAGA AGCCAGTGCT GACCCTGCCG CGCCTGTCGA TCGAGGCAGG CGAGCGCGTC
GCCATCCTGG GCCGCGTCGG CGCCGGCAAG TCCACGCTGC TGCGGCTGCT CGGCGGCCTG
GCCACGCCCG TCCAGGGCCG CATCCTGCTC AATGACACGC CGCTGCCCCT GATCGACGTC
GCCGACGTCC GGCGCGACGT CGGCATGGTG CTGCAGGAAT CAAGCCTGTT CTTCGGCACG
CTGCGCGAGA ACATGCGGAT CGCCAGCCCG CTCGCCAGCG ACGAGGCCAT CCTCGCCGCC
ATGCGGCTGT CTTGCGCCGA CCAACTGCTG CTCAACCAGC CGCACGGCCT CGACCTGCAG
CTGCGCGAGA GCGGGCTGGG CCTGTCGGGC GGCCAGAAGC AGGCGCTGAT CCTGGCGCGC
ACATTCCTGC GCTCGCCCAG CGTGCTGCTG CTGGACGAGC CGACCGCTTC GCTCGACGAG
GCGACCGAGG CCGCCATCAT CGAGCGGATG AAACCGTGGC TCGGCCAGCG CACCCTGATC
GTCGCCACCC ACCGCTACCC GGTGCTGTCG CTGGTGGACC GCATCATCGT CATCGACGGC
GGACGGATCG TGCGCGACGG GCCGAAGGAC GAGATCCTGG CCGGCCTGCG CGGCACCGCC
GCCAACCAGG AGGCCGCCCG CCGGCCGCAG CCGGCGCACG CCGCGGAGGC GACGCGATGA
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| Protein sequence | MTDPARLDAA PVPADDDTGA REAGRWVEPL LLAARHLGLS VSPELVRSAA TWSKHAEPDA
AIVDLAASAG LTAQFVELPV AQLSPVMLPA LVPIDGRHIG VAVAVAGGRL TVLLAIDGKT
VERALPLDGP GHGTPSRILL VHEHTVRRDG RLDAYLAARP NTWLQDLFTG HWPLLLELGA
GSLFGNLLAV GTSLFAMQVW DRVVPARSTH TLWVLASGVA LALLLELLLR TARVAIADHF
GKAADLKLSA MFFARVLDIR NDARPRSPGT LIAQLRDLEQ LRELLTSSTL GVLIDLPFVA
AFLCIIWLLG GPLAFVPLAA IPLLIMPGVL AQIPLAKLSN AGLAEAAVRN AILMESIYRV
EDIKTLQAEP RFRHLWNHTN RVNADIGLKQ RHLGGLLVNL ASTVQQFAYV GVLVTGVYGM
LDASLSFGAV LACSILTSRT IAPLGQIPAV LARVQNVRVG KKGLDSLLSL PVDHDPAKDA
YHKPALIGRY RFDNVAYGFD PEEKPVLTLP RLSIEAGERV AILGRVGAGK STLLRLLGGL
ATPVQGRILL NDTPLPLIDV ADVRRDVGMV LQESSLFFGT LRENMRIASP LASDEAILAA
MRLSCADQLL LNQPHGLDLQ LRESGLGLSG GQKQALILAR TFLRSPSVLL LDEPTASLDE
ATEAAIIERM KPWLGQRTLI VATHRYPVLS LVDRIIVIDG GRIVRDGPKD EILAGLRGTA
ANQEAARRPQ PAHAAEATR
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