| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05068 |
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| Symbol | RSp1178 |
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| ID | 1223490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1484243 |
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| End bp | 1486273 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637241043 |
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| Product | composite two-component sensor histidine kinase and response regulator hybrid transcription regulator protein |
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| Protein accession | NP_522739 |
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| Protein GI | 17549399 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.68498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGTTCGA TCGTGAAGTC CTTGCTGCAT CCTTCCTCTC GTGCCCCCGC TGCGCACCGC
GCGCAGGACG CGGCACTCTT CAGCACCCAT CCCCAGGGAG ACGCCCCGCC GATCCGGCCC
TCCGCCTGGC TGGTGGCGAT CGGCGCGGCT GTCGCGGGCA CGTTCGCGCG GCTGATGCTG
GAATCGGCCG CCGGCATCCG GCTGCCGTTC TACCTGGCGT TTCCGGTGGT GACCGTGGCC
GCGTGGTACG GGGGCTTCTG GCCGGGCGTG GTCGCCATCG CCGGCTATGC CGCGCTCTTC
GCGGGGCTGG CGGCCCTGCA GATTTCGCCG CCGCCCGCGC AGCCGATCCT GCCGACGCAG
CTGGTGGTGC TGGCCCTGGG CACCCTGCTG ATCTGCGTGC TGTGCGAACA GCTGCGGCGC
GCCCGCGCGG GCGCGGAACG CCGCGCGCGC GCCGAGACCC AGCAGCGCGT CTCGCAGCAG
CGGCTGCTGG CCGCGCTGCA GGCCTCGCCC ATCTCGCTGT ACGACGTCGA TAACACGATG
CACTTCACCT GGGTGCACAA CCCGGTGTTC GGCCTGCAGC CGCACGAACT GCTCGGGCGC
ACCGTGCGCG AGGTGTTCGG CCGCCGCGCC GCCTCGCGCC TGACCGATGC CGGCCAGCGG
GTGATCGCCA CCGGCTTGCC CACGCGCGTC GAGTTCGCCT TCCGCCGCCG GCACACCCAG
CGCGTGGTCT ACGACGTGGT CGTGATGCCG CTGCGCGACG ACACCGGCGA GATCATCGGC
CTGACCAACG CCGTCATCGA CATCACCGAG CACCGCCAGG CCGAGGCGCG CCGCGCGCTG
CTGCTGGAGG CCGAATCGCG CGCCCGCGAG GAAGCCGAGC GCGCCAGCCG CCTGAAGGAC
GACTTCCTGG CCACCGTCAG CCACGAGCTG CGCACGCCGC TCAACGCGGT GCTGGGCTGG
GCGCAGCTGC TGGCGATGCG CCCCTACGAC GAGGCCATGT TCCGGCGCGG CCTGGAGGCC
ATCGAGCGCA GTGCCCGCAC GCAGGTCCAC CTGATCGACG ATCTGCTCGA CATGTCGGCC
ATCCTGTCCG GCAAGGTGCC GCTGGAGATC GGGCCGGTGG ACCTGGCCGA CGTGCTGGAG
CGCGCGCGCG AAACCATCGA GCCGATGGCG CGGCAGAAGC AGATCACGGT CGACACCGAA
TACCTGCCGG TGCCGCTGCT GCAGGGCGAC GCCGGCCGAC TCAAGCAGGT GTTCTGGAAC
CTGCTGGCCA ATGCGGTCAA GTTCACGCCC GAGGGCGGGC ATGTGCGGAT CACCGTGCAG
GCCGGCGCGG ACGGCCTGGT GGCAACGGTG CGCGACACCG GTATCGGCAT CGAGCCGACC
TTCCTGCCGC ACGTCTTCGA TCGCTTCCAG CAGGCGGACC TGTCGAGCAC GCGCCGTCAT
GGCGGGCTCG GCCTGGGCTT GGCGATCGCC AAGCAGCTGG TGGAGCTGCA CCACGGGCAC
ATCACGGCGG CCAGCAGCGG CGCCGACCTC GGCACGACCA TGGCCGTGAC CCTGCCGCTG
CATGCGCCGC CGTCGAACGA ACCGCCGGGC CGCGCGCCGG GCCTGGTCAC CGGGACAGCC
GCGCCGGCGC TCGACGGCCT GCGCGTGCTG GTGGTGGACG ACAATGCCGA ATCGCTGGGC
GTGATCGCGC TCATGCTGGA GCGCTACGGC GCCGAGGTCG TTACCGTCGC CAGCGGCGCG
GCCGCGCTCG ATGCGCTCGA TCGCGCGGCG GGCGGCCCGC CGTTCGATGC GCTGGTCAGC
GACCTGGCCA TGCCCGGCAT GGACGGCATG CAACTGCTGC GGGCCATCCG CGCGCGCGGG
CTGACGGCGC TGCCGGCCAT CGCCGTGACC GCCTTTGCCG ACCCGATCCG CCTGAAGGCC
GCCAAGGAAG CGGGCTACCA GTCCGTCATC ACCAAGCCGA TCTTCCCCGG CGAACTCGGC
CACGTGCTGG CCGCCAATGT CCGGCGGGCC ACCGGACCGC AGGACGCCTG A
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| Protein sequence | MRSIVKSLLH PSSRAPAAHR AQDAALFSTH PQGDAPPIRP SAWLVAIGAA VAGTFARLML
ESAAGIRLPF YLAFPVVTVA AWYGGFWPGV VAIAGYAALF AGLAALQISP PPAQPILPTQ
LVVLALGTLL ICVLCEQLRR ARAGAERRAR AETQQRVSQQ RLLAALQASP ISLYDVDNTM
HFTWVHNPVF GLQPHELLGR TVREVFGRRA ASRLTDAGQR VIATGLPTRV EFAFRRRHTQ
RVVYDVVVMP LRDDTGEIIG LTNAVIDITE HRQAEARRAL LLEAESRARE EAERASRLKD
DFLATVSHEL RTPLNAVLGW AQLLAMRPYD EAMFRRGLEA IERSARTQVH LIDDLLDMSA
ILSGKVPLEI GPVDLADVLE RARETIEPMA RQKQITVDTE YLPVPLLQGD AGRLKQVFWN
LLANAVKFTP EGGHVRITVQ AGADGLVATV RDTGIGIEPT FLPHVFDRFQ QADLSSTRRH
GGLGLGLAIA KQLVELHHGH ITAASSGADL GTTMAVTLPL HAPPSNEPPG RAPGLVTGTA
APALDGLRVL VVDDNAESLG VIALMLERYG AEVVTVASGA AALDALDRAA GGPPFDALVS
DLAMPGMDGM QLLRAIRARG LTALPAIAVT AFADPIRLKA AKEAGYQSVI TKPIFPGELG
HVLAANVRRA TGPQDA
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