| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS04813 |
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| Symbol | RSp1536 |
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| ID | 1223848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1924001 |
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| End bp | 1926541 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637241399 |
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| Product | hemagglutinin-like signal peptide protein |
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| Protein accession | NP_523095 |
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| Protein GI | 17549755 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01731] adhesin HecA family 20-residue repeat (two copies)
[TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.565889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGTCAC CACACCGCCC GGCCCACCTG GCCGCGCTCC TCGGCCTATG CGCCGTCTTC
GTCCCGCCGG TCGCCGTAGC CGCCGGCATC GTCCCCGACG GCGGCACCGC CACCACGGTC
ACCACAGGCG CCACCGGCCG CCCAGTAGTC AACCTCGCCC CCAGCACCGC AGGCGTCTCC
CACAACACCT ACACCTCCTT CAACGTAGGC CCAGTCGGCG CCGACCTGAA CAACGCCACC
GTCCGCGCCC GCACCATCGT CAACCAGGTC ACCAGCACCG ACCCGTCGCT GATCCAGGGC
AACATCGCCG TGCTCGGCAC GCGCGCCAAC GTGATCATCG CCAACCCGAA CGGCATCACG
GTGGACGGCG GTTCGTTCAC CAACACGGGC AATGTGGCGC TGACCACGGG CCAGGTGTCG
TTCAACGACT TCACCACGGG CGCCGGCCAG CTGCAGCGCA ACGTGGTACT CAATACCGGC
GCCGGCGCCA TCAACATCGG CCCGGGCGGC CTGGCCGGGG CGATGCTGAA CCTGGAGCTG
ATCGCCAAGC AGGTGCGCGT GGCGGGCGCG GTGCAGAACA GCTTCACCGA TGCCAACAGC
AAGGTCCGCA TCGTCGCGGG CGACAGCCGG GCGGAGATCG ATACCAGCGT GTCGCCCACC
GATAACCTGA ACCCGTGGGT CACCTACAGC AGCACGGGAT CGGGCCGGCC GCTGGGGCTG
GCCATCGATA TCGCGTCGGG CGGGTCGCTC ACGGGCGGGC GGATCGAGCT GCTGGTCACG
GACCAAGGCG CGGGCGTGCG GCATGCCGGC GCGGCGTTTG CGACGGCCGG CGATTTCGTC
ATCAGCAGCA CGGGTGACTT GCAACTGGGC GGCGGCAGCG TCAGCGCGGC CAATGATGTG
CTGATCGGTT CGGCGGGGCT GTTGGGCAAT GGCGCGCTGG CGGCCGGTCG TAACCTCCAG
GTGAGTGCGA ACAAGGTGCA TCTCGATGGC GCCACGTTGT CGGCAGGTAC CGCTGCCCAG
GTCGGCAGCA TCGTGATCGG CGCGTCGGGG CAGGTGCACA CCGAGCCGGT CACGATCGAC
CACGGTACGC TGAGCGCGAC GGGCGGCGTC GGCCTGTTCG ATGCCGGGCC CGGGGTCTCC
ATGACGGCAA CGCAGTTGAC GGCGGCCCAG AACGTGGTCA CGCAGGTCGG GTCGCTGTCG
CTCGGTGCGG ATGCATCGGG CGCGAGCCGA TGGACCTCGC AGCAGGGCAC GGTGGCGATC
ACCGCGCCCG GTACTGTGCA GGTGGCCGGC AGCAAGATCG ACGGCACGGG TGGGACGACG
GTGCAGGCCG GTTCCATCGC GCTCAGCGCG GCGAACGGCG CGGCGGCCAC GGTGCAATCC
TCGGGCGGCG ACGTGACGCT GAATGCCACG GGTGCCTACG GGCAGACCGA CTCGAATGTC
ATCGCCGCCG GCCACGCGAC GATCCACGGT GGCAGCGTCA ACCTCGCGGC GTCGGCGCTG
CCGGCGTCGG TGGCGGCCAT GAACGGCGGG GTGCTGATCC GGAGCGATGC GGATCTCGTC
AACCTCGGCG GGCTGATCCA AGGCAAGGCG CGCAACGCCG GCCAATCGGC CTCCGAAGGC
GCGGTCACGC TGATTGCGGC TGGAGTCGTG CGCAACGATG CCACCGCGAG CACGCAAGGC
ATCGTCTTCG GTCAGGACGA TGACGTGGTG GTGCGCGCCG GCGGCGACAT CGTCAACCAC
CAGAGCCGCA TCCTGTCGAA CGCGAAGCTG ACGCTGGCCG CGGAGGGCGA TGTGTTCAAC
ACGCTGGACA AGACCGCCGG CGCCAACGGT GAGAAGCCCG TCGCCTGGAC CAGCAGCGGC
ACGCGCTGGC TGTTCCTGCG CAACCACAGC GCGGGGCTCG ATGTGGACTA CGGTTCCATT
CCGCAGACGG GCCAGGTGCC GTATTTCGTG TCGCAAACGG GCACGACGAT CAGCGGCCGC
AACGTCAGCA ACATCGGCGG GCAGGTGCTC TCCAACGGCG GCGATATCGC CATCACGGCC
GCCAACGTGT TCCATAACGA AGCGCTGGCG ACGGGCTCGG CGCATTTCAG CCGCAGTTGC
ATGATCTTCT GCCGCACCGA TGCATCGAGC ACGGTGTCGA CCACGGGTGG CGCGATTTCG
GCAGGCGGCA ACCTGTCCAT CCGGGCCGGC ACGCTGGCCG AGAACATCGG CGGGCAGGTG
CTCTCCGTCG GTAGCATGAT GGTGACTGCG CCCAAGGTAC GCGCGGTCGG CATCACCGGC
TACACGGCGC TGGCGCGCGA GCGGGGCTTC AAGGCATTCT TCGGCGATAC GTGGGCGCGC
CTGTACGCGG CCGATGTGGG TGGCAGCTGG TTTGCCATCG GCGGTGGCCT GACGATCAAT
GGCCAGGGGC AGATCGAGGG CGGCAGTTTT GATGGGCAGA CCGTCACGGC CAGCAACGGC
ATCGTGACGG TGCGGGCGAA GTCGCGGCAG CCGGTGTCGA TCGAGTCGCG TGTCGGCTTG
ACGTCGTGGT TGTGGCAGTG A
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| Protein sequence | MQSPHRPAHL AALLGLCAVF VPPVAVAAGI VPDGGTATTV TTGATGRPVV NLAPSTAGVS
HNTYTSFNVG PVGADLNNAT VRARTIVNQV TSTDPSLIQG NIAVLGTRAN VIIANPNGIT
VDGGSFTNTG NVALTTGQVS FNDFTTGAGQ LQRNVVLNTG AGAINIGPGG LAGAMLNLEL
IAKQVRVAGA VQNSFTDANS KVRIVAGDSR AEIDTSVSPT DNLNPWVTYS STGSGRPLGL
AIDIASGGSL TGGRIELLVT DQGAGVRHAG AAFATAGDFV ISSTGDLQLG GGSVSAANDV
LIGSAGLLGN GALAAGRNLQ VSANKVHLDG ATLSAGTAAQ VGSIVIGASG QVHTEPVTID
HGTLSATGGV GLFDAGPGVS MTATQLTAAQ NVVTQVGSLS LGADASGASR WTSQQGTVAI
TAPGTVQVAG SKIDGTGGTT VQAGSIALSA ANGAAATVQS SGGDVTLNAT GAYGQTDSNV
IAAGHATIHG GSVNLAASAL PASVAAMNGG VLIRSDADLV NLGGLIQGKA RNAGQSASEG
AVTLIAAGVV RNDATASTQG IVFGQDDDVV VRAGGDIVNH QSRILSNAKL TLAAEGDVFN
TLDKTAGANG EKPVAWTSSG TRWLFLRNHS AGLDVDYGSI PQTGQVPYFV SQTGTTISGR
NVSNIGGQVL SNGGDIAITA ANVFHNEALA TGSAHFSRSC MIFCRTDASS TVSTTGGAIS
AGGNLSIRAG TLAENIGGQV LSVGSMMVTA PKVRAVGITG YTALARERGF KAFFGDTWAR
LYAADVGGSW FAIGGGLTIN GQGQIEGGSF DGQTVTASNG IVTVRAKSRQ PVSIESRVGL
TSWLWQ
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