| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS04801 |
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| Symbol | RSp1524 |
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| ID | 1223836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1908459 |
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| End bp | 1909976 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637241387 |
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| Product | hypothetical protein |
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| Protein accession | NP_523083 |
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| Protein GI | 17549743 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0299872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTGT CGCGACTCGC TGGCGCGATC CTGAGACGCC CGCCCCTGAT GATCGTCGGC
GCCCTCGCAC TGTCGGCGGC CGTGGCGACG CTCACCGTCC TCTCGCTCTA CGAAATGCGG
ATGGACGCGC TGGCACGGGC GCGCGATTCC GCCGACAACG TCTCGCTGAT CCTGCAGCGG
GATATCGCGC GCAACCTCGA AGTCTACGAA CTGTCGATGC AGGCGGTCAT CGATGGCGTG
CGGGACCCGG CCATCCTGGC GCTGCCGCCG ACAATCCGGC AGCTGGTGCT GTTCGACCGC
TCGACCAACG CGCAGGACCT GGGCTCGCTG CTGGTCACCA ACGCCGCCGG CGACGTCATC
ATCGACTCGC GCTCGGTGCC GCCCCGGCGC ATCCACATCG GCGACCGCGA TTACTTCAAG
ATCCAGCAGC AATCGGCGGA TGCCGGCCTG TACCTGAGCA AGCCGTTCAT GCCCCGCATC
AACGGTGTCG AGACGTCGAT CGGCATCAGC CAGCGCCTGA ACGGACCGGA CGGCACCTTC
AACGGCATCG TGGTCGGCAC GCTGCGGCTC AACTACTTCC GGCGGCTGTT CGACGGCGTG
AGCCTGGGCG AGCACGCCGC CATCACGCTG GTCCGCACCG ACGGCACGCT GCTGATGCGC
CGCCCGTACG ACGCGCACCT GATCGGCAGC GACCTGTCCG CCAGCCCGGC CTTCCAGATG
CGCAAGGACG CACCGGCGGG CAGCCTGATC GTCACCGGGG CCATCGATGG CGTGGAGCGG
CTGTTCAGCT ACCGGCGCAT CGGCGACTAT CCGCTGATCC TCTCGGTGGG GCTGGCCCTC
GACGACATCT ACGCGGAGTG GCGCCAGCGG GCCTGGTGGA TCGGCGGGAT CGTGCTGCTG
CTGGATGCCG TGCTGATCGG CATGTCGATC CTGTTCGCCA GGCAGCTGCG CCGGCGCATG
GAGGCCGAGC AGAAGCTGGC ATGGCTGGCC AACACCGACG GCCTGACCGG CCTGGGCACG
CGCCGCGCGC TGGACGCGGC GCTGGAGGCG GAGTGGCAGC GCGCCAACCG GCAGGGCCGG
CCGCTCGCGG TGCTGATGAT CGACGTCGAC GAATTCAAGC ACTACAACGA CCGCTATGGC
CACGCCGCGG GCGATACCGT GCTGCGTACG GTCGCGCGCT GCGTCAACGA CAGCATCCGG
CGCCCCGGCG ACTTTGCCGG CCGCTACGGC GGCGAAGAAT TCTGCGTGCT GCTGCCCGAC
ACCGACCTTG CCGGCGCCCA GCGGGTGGCC GAGATCATCC GCGCCACCGT GCTCGCCGCC
GGCGAGCCGA ACGCCGGCAG CGCGCACGGC AGACTCACGG TGAGCATCGG CGTCGCGGCC
CACGACGGCC GCGGCGACAC CGGCACCACC CCGGCGCGGC TGCTCCACCA CGCCGATCTC
CAGCTCTACG AAGCCAAGTC CGGCGGACGC AACGCCGTGA TGCCGCGACA GGAGCGGCCA
CGGCTGGCAG TGGTGTAG
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| Protein sequence | MPLSRLAGAI LRRPPLMIVG ALALSAAVAT LTVLSLYEMR MDALARARDS ADNVSLILQR
DIARNLEVYE LSMQAVIDGV RDPAILALPP TIRQLVLFDR STNAQDLGSL LVTNAAGDVI
IDSRSVPPRR IHIGDRDYFK IQQQSADAGL YLSKPFMPRI NGVETSIGIS QRLNGPDGTF
NGIVVGTLRL NYFRRLFDGV SLGEHAAITL VRTDGTLLMR RPYDAHLIGS DLSASPAFQM
RKDAPAGSLI VTGAIDGVER LFSYRRIGDY PLILSVGLAL DDIYAEWRQR AWWIGGIVLL
LDAVLIGMSI LFARQLRRRM EAEQKLAWLA NTDGLTGLGT RRALDAALEA EWQRANRQGR
PLAVLMIDVD EFKHYNDRYG HAAGDTVLRT VARCVNDSIR RPGDFAGRYG GEEFCVLLPD
TDLAGAQRVA EIIRATVLAA GEPNAGSAHG RLTVSIGVAA HDGRGDTGTT PARLLHHADL
QLYEAKSGGR NAVMPRQERP RLAVV
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