Gene RS04799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS04799 
SymbolRSp1522 
ID1223834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1904941 
End bp1907592 
Gene Length2652 bp 
Protein Length883 aa 
Translation table11 
GC content71% 
IMG OID637241385 
Producthypothetical protein 
Protein accessionNP_523081 
Protein GI17549741 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0255937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACG CCGCGTCGAA CGACGCCAGT CCCAAACCTG AACGCCAGCG CGGCCCGACC 
GCTGCGCCGG ATGCCGAGCC GTCTGCCGCT CCGGCCGAGG CCGCCCGGTC CGATTCCGGG
CTGGGCCTGG GCGCCTGGGT CATGATCGGG ATCGTCCTGG TCCTGGGGGC GCTCGTGTTC
GACAGCCTGT ACGCGCTGCT CGACCACGTT CACTACGCCG ACATGGTGGC CGCGCTGCAG
GCCACGCCGG CCAGGCAGCT GTGGCTCGCC ATCCTGGCCA CGGCCCTGAG CTACGTCGCC
CTGACCGGCT ACGACGCCTC CGGGCTGCGC TATGTCGGTG CCCGGGTCCC GCCGGGCACC
GTTGCCACCA CCTCCTTCAT TGCCTATGCC CTGGGCAACA CCATCGGCCT GGGCTCGCTC
ACCGCGGGCT CGGTGCGCGC GCGGCTGTAC ACGGCGGCCG GGCTGGATGC CGCGAGCGTG
ACGGCGGCGG TCGCCTTCGA CGCCAGCGCG CTGGGCGTGT CGACCACGGC CTTCGGTGCG
GTGGGCCTGC TGTGGGGCGC GCCGCACATC GCCGCGCAGA CCCATCTGCC GGCCTCGCTG
CTGGAGGCGC TCGCCCTGCT GGTGCTGGCC GGCGTGGTGG TGCTGCTGGC GTTGTGCCTG
CGGCGGCGCC ACGTCACGCT GTTCGGCCGC TGGGAGATCC GCCTGCCGCC GCCGGGGCTG
GCGGCGCAGC AGTTCGTCAT CTCGGCGGCG GACCTGAGCG CGGCCGCCGC CGCGCTGTGG
GTGCTGCTGC CGCCGGGCGT GGTCGAGCTG CCGACCTTCG TGGCGTTCTA CGCCCTGGCC
ATGACGCTGG GCGTGCTGAG CCAGAGCCCG GGCGGCCTGG GCGTGTTCGA GGCGGTGATC
CTGCTGGGCT GCAGCGGCCA AGCCTCGCCC GCGCAGGTGC TGGCCGCGCT GCTGTATTAC
CGCGCCATCT ACTTCCTGCT GCCGCTGGTG GTCGCGGCCG CCATGCTGGC GCTGTTCGAG
CTGCGCTCGG GCGCGGGCGC GCCCTTTGCC CGGTCGGCGG TCAAGCTGTC GCCGGGGCTG
CTGGCGGCGC TGACGATGGT GGCCGGCGTC ATGCTGCTGG TGTCGGGCGT GACCCCCGCC
ACCGACGAGG CCGAAGACCT GCTGCGCATG CATGTGCCGC TGTTCGTGGT GGAGGCCTCG
CACATGATCG GCAGCGTGGC CGGGCTGATC ATGCTGTTCG TCGCGCGCGG GCTGCTGCAC
CGGCTCGATG CGGCCTGGTG GGCGGCGCTG GTGCTGTCGC TGCTGACCGG CGTGCTGGCG
CTGCCCAAGG GCATCGCCGT GTCGGAGATG ACGGTGCTGG TGACGCTGGC GGTGCTGCTG
GTGCTGTCGC GCCGGCAGTT CGACCGGCCG TCGTCGCTGT TCTCGCAGCG GCTGGAGCCG
GGCTGGCTGA TTGCCATGGC GTGCGTGTTC GCGGCCTGCG TGTGGATCCT GTTCTTCGCC
TACCGCGAGG TCGCCTACGC CAACCAGTTG TGGTGGCAGT TCACCTTCGA CGGCGATGCA
CCGCGCTCCA TCCGCGCGCT GATGGCGGTG GCGATCACCG GCCTGGGCTT CGGCCTGTGG
CAACTGTTCC GCCGCGAGCC CGGCGTGACC GCCTACCCGA GCGTGGCCGA GCTCGAGCGC
GCCGCCGAGA TCATCCGCAA GCAGCCCGCC GCCGACGCCG CGCTGGCGCT GATGGGCGAC
AAGAGCCTGC TGTTCTCGCC GTCGGGCAAC GCCTTCATCA TGTACGCCAA GCAGGGGCGC
TCGTGGGTCG CGCTGTCCGA TCCGGTCGGC GCGCAGCAGG ATTGGCCCGA ACTGATCTGG
CGCTTCATCG AGCTGGCCGA TGCCCACGGC GGCCGCGCGG CCTTCTACAA GACCCGTCCG
CAGACCCTGC CGCTATACCT CGATGCCGGC CTGCGCGCCT ACAAGCTGGG GGAGGAAGCG
TACGTCGCGC TGCCCGAGTT CAGCCTGAAG GGGTCGCGCC GGGCCAATCT GCGCCATGGC
GTGACGCGCG GTGAGCGCGA GGGGCTGTCG TTCGAGATCG TGCCGGCGGA GGGCGTGCCG
GCCGAGCTGC GGGAGTTGCG CGAGATTTCC GACGAATGGC TGCGCAACCA GAACGCGCGC
GAGAAGGGCT TCTCCCTCGG CGCGTTCGAA GAGCGCTACG TGCTGAGCCA GCCGGTGGCG
GTGGTGCGCC GCGAGGGCCG CATCCTGGCC TTCGCCACGC TGATGTGCCC GGACGTGCTG
CGCATCGAGG CCAGCGTCGA CCTGATGCGC TATCGCACCA GCGTGCCGCC CGGCACCATG
GATTTCTTGT TCGGCAAGCT GATCCTGCAT TTCCAGGCGG CCGGCTACCA GCGCTTCGGC
CTGGGCATGG CGCCGATGTC GGGCATGGTC GAGCACCAAC TGGCCCCGCG CTGGCACCGC
TTCGGACGGA TGATGTTCCG CCACGGCGCG CGCTTCTACA ATTTCCGTGG GCTGCGCAAT
TTCAAGGACA AGTTCGAGCC GGTGTGGGAA CCCCGCTACC TGCTCGCGCG CGGTGGCCTG
GCCCCGCTAT TTACATTGAC TGATGTCGCG GCCCTGATCG GTGGCGGCCT GAAGGGAGTG
ATCTCCAAAT GA
 
Protein sequence
MPDAASNDAS PKPERQRGPT AAPDAEPSAA PAEAARSDSG LGLGAWVMIG IVLVLGALVF 
DSLYALLDHV HYADMVAALQ ATPARQLWLA ILATALSYVA LTGYDASGLR YVGARVPPGT
VATTSFIAYA LGNTIGLGSL TAGSVRARLY TAAGLDAASV TAAVAFDASA LGVSTTAFGA
VGLLWGAPHI AAQTHLPASL LEALALLVLA GVVVLLALCL RRRHVTLFGR WEIRLPPPGL
AAQQFVISAA DLSAAAAALW VLLPPGVVEL PTFVAFYALA MTLGVLSQSP GGLGVFEAVI
LLGCSGQASP AQVLAALLYY RAIYFLLPLV VAAAMLALFE LRSGAGAPFA RSAVKLSPGL
LAALTMVAGV MLLVSGVTPA TDEAEDLLRM HVPLFVVEAS HMIGSVAGLI MLFVARGLLH
RLDAAWWAAL VLSLLTGVLA LPKGIAVSEM TVLVTLAVLL VLSRRQFDRP SSLFSQRLEP
GWLIAMACVF AACVWILFFA YREVAYANQL WWQFTFDGDA PRSIRALMAV AITGLGFGLW
QLFRREPGVT AYPSVAELER AAEIIRKQPA ADAALALMGD KSLLFSPSGN AFIMYAKQGR
SWVALSDPVG AQQDWPELIW RFIELADAHG GRAAFYKTRP QTLPLYLDAG LRAYKLGEEA
YVALPEFSLK GSRRANLRHG VTRGEREGLS FEIVPAEGVP AELRELREIS DEWLRNQNAR
EKGFSLGAFE ERYVLSQPVA VVRREGRILA FATLMCPDVL RIEASVDLMR YRTSVPPGTM
DFLFGKLILH FQAAGYQRFG LGMAPMSGMV EHQLAPRWHR FGRMMFRHGA RFYNFRGLRN
FKDKFEPVWE PRYLLARGGL APLFTLTDVA ALIGGGLKGV ISK