Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS04799 |
Symbol | RSp1522 |
ID | 1223834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1904941 |
End bp | 1907592 |
Gene Length | 2652 bp |
Protein Length | 883 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637241385 |
Product | hypothetical protein |
Protein accession | NP_523081 |
Protein GI | 17549741 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0255937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGACG CCGCGTCGAA CGACGCCAGT CCCAAACCTG AACGCCAGCG CGGCCCGACC GCTGCGCCGG ATGCCGAGCC GTCTGCCGCT CCGGCCGAGG CCGCCCGGTC CGATTCCGGG CTGGGCCTGG GCGCCTGGGT CATGATCGGG ATCGTCCTGG TCCTGGGGGC GCTCGTGTTC GACAGCCTGT ACGCGCTGCT CGACCACGTT CACTACGCCG ACATGGTGGC CGCGCTGCAG GCCACGCCGG CCAGGCAGCT GTGGCTCGCC ATCCTGGCCA CGGCCCTGAG CTACGTCGCC CTGACCGGCT ACGACGCCTC CGGGCTGCGC TATGTCGGTG CCCGGGTCCC GCCGGGCACC GTTGCCACCA CCTCCTTCAT TGCCTATGCC CTGGGCAACA CCATCGGCCT GGGCTCGCTC ACCGCGGGCT CGGTGCGCGC GCGGCTGTAC ACGGCGGCCG GGCTGGATGC CGCGAGCGTG ACGGCGGCGG TCGCCTTCGA CGCCAGCGCG CTGGGCGTGT CGACCACGGC CTTCGGTGCG GTGGGCCTGC TGTGGGGCGC GCCGCACATC GCCGCGCAGA CCCATCTGCC GGCCTCGCTG CTGGAGGCGC TCGCCCTGCT GGTGCTGGCC GGCGTGGTGG TGCTGCTGGC GTTGTGCCTG CGGCGGCGCC ACGTCACGCT GTTCGGCCGC TGGGAGATCC GCCTGCCGCC GCCGGGGCTG GCGGCGCAGC AGTTCGTCAT CTCGGCGGCG GACCTGAGCG CGGCCGCCGC CGCGCTGTGG GTGCTGCTGC CGCCGGGCGT GGTCGAGCTG CCGACCTTCG TGGCGTTCTA CGCCCTGGCC ATGACGCTGG GCGTGCTGAG CCAGAGCCCG GGCGGCCTGG GCGTGTTCGA GGCGGTGATC CTGCTGGGCT GCAGCGGCCA AGCCTCGCCC GCGCAGGTGC TGGCCGCGCT GCTGTATTAC CGCGCCATCT ACTTCCTGCT GCCGCTGGTG GTCGCGGCCG CCATGCTGGC GCTGTTCGAG CTGCGCTCGG GCGCGGGCGC GCCCTTTGCC CGGTCGGCGG TCAAGCTGTC GCCGGGGCTG CTGGCGGCGC TGACGATGGT GGCCGGCGTC ATGCTGCTGG TGTCGGGCGT GACCCCCGCC ACCGACGAGG CCGAAGACCT GCTGCGCATG CATGTGCCGC TGTTCGTGGT GGAGGCCTCG CACATGATCG GCAGCGTGGC CGGGCTGATC ATGCTGTTCG TCGCGCGCGG GCTGCTGCAC CGGCTCGATG CGGCCTGGTG GGCGGCGCTG GTGCTGTCGC TGCTGACCGG CGTGCTGGCG CTGCCCAAGG GCATCGCCGT GTCGGAGATG ACGGTGCTGG TGACGCTGGC GGTGCTGCTG GTGCTGTCGC GCCGGCAGTT CGACCGGCCG TCGTCGCTGT TCTCGCAGCG GCTGGAGCCG GGCTGGCTGA TTGCCATGGC GTGCGTGTTC GCGGCCTGCG TGTGGATCCT GTTCTTCGCC TACCGCGAGG TCGCCTACGC CAACCAGTTG TGGTGGCAGT TCACCTTCGA CGGCGATGCA CCGCGCTCCA TCCGCGCGCT GATGGCGGTG GCGATCACCG GCCTGGGCTT CGGCCTGTGG CAACTGTTCC GCCGCGAGCC CGGCGTGACC GCCTACCCGA GCGTGGCCGA GCTCGAGCGC GCCGCCGAGA TCATCCGCAA GCAGCCCGCC GCCGACGCCG CGCTGGCGCT GATGGGCGAC AAGAGCCTGC TGTTCTCGCC GTCGGGCAAC GCCTTCATCA TGTACGCCAA GCAGGGGCGC TCGTGGGTCG CGCTGTCCGA TCCGGTCGGC GCGCAGCAGG ATTGGCCCGA ACTGATCTGG CGCTTCATCG AGCTGGCCGA TGCCCACGGC GGCCGCGCGG CCTTCTACAA GACCCGTCCG CAGACCCTGC CGCTATACCT CGATGCCGGC CTGCGCGCCT ACAAGCTGGG GGAGGAAGCG TACGTCGCGC TGCCCGAGTT CAGCCTGAAG GGGTCGCGCC GGGCCAATCT GCGCCATGGC GTGACGCGCG GTGAGCGCGA GGGGCTGTCG TTCGAGATCG TGCCGGCGGA GGGCGTGCCG GCCGAGCTGC GGGAGTTGCG CGAGATTTCC GACGAATGGC TGCGCAACCA GAACGCGCGC GAGAAGGGCT TCTCCCTCGG CGCGTTCGAA GAGCGCTACG TGCTGAGCCA GCCGGTGGCG GTGGTGCGCC GCGAGGGCCG CATCCTGGCC TTCGCCACGC TGATGTGCCC GGACGTGCTG CGCATCGAGG CCAGCGTCGA CCTGATGCGC TATCGCACCA GCGTGCCGCC CGGCACCATG GATTTCTTGT TCGGCAAGCT GATCCTGCAT TTCCAGGCGG CCGGCTACCA GCGCTTCGGC CTGGGCATGG CGCCGATGTC GGGCATGGTC GAGCACCAAC TGGCCCCGCG CTGGCACCGC TTCGGACGGA TGATGTTCCG CCACGGCGCG CGCTTCTACA ATTTCCGTGG GCTGCGCAAT TTCAAGGACA AGTTCGAGCC GGTGTGGGAA CCCCGCTACC TGCTCGCGCG CGGTGGCCTG GCCCCGCTAT TTACATTGAC TGATGTCGCG GCCCTGATCG GTGGCGGCCT GAAGGGAGTG ATCTCCAAAT GA
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Protein sequence | MPDAASNDAS PKPERQRGPT AAPDAEPSAA PAEAARSDSG LGLGAWVMIG IVLVLGALVF DSLYALLDHV HYADMVAALQ ATPARQLWLA ILATALSYVA LTGYDASGLR YVGARVPPGT VATTSFIAYA LGNTIGLGSL TAGSVRARLY TAAGLDAASV TAAVAFDASA LGVSTTAFGA VGLLWGAPHI AAQTHLPASL LEALALLVLA GVVVLLALCL RRRHVTLFGR WEIRLPPPGL AAQQFVISAA DLSAAAAALW VLLPPGVVEL PTFVAFYALA MTLGVLSQSP GGLGVFEAVI LLGCSGQASP AQVLAALLYY RAIYFLLPLV VAAAMLALFE LRSGAGAPFA RSAVKLSPGL LAALTMVAGV MLLVSGVTPA TDEAEDLLRM HVPLFVVEAS HMIGSVAGLI MLFVARGLLH RLDAAWWAAL VLSLLTGVLA LPKGIAVSEM TVLVTLAVLL VLSRRQFDRP SSLFSQRLEP GWLIAMACVF AACVWILFFA YREVAYANQL WWQFTFDGDA PRSIRALMAV AITGLGFGLW QLFRREPGVT AYPSVAELER AAEIIRKQPA ADAALALMGD KSLLFSPSGN AFIMYAKQGR SWVALSDPVG AQQDWPELIW RFIELADAHG GRAAFYKTRP QTLPLYLDAG LRAYKLGEEA YVALPEFSLK GSRRANLRHG VTRGEREGLS FEIVPAEGVP AELRELREIS DEWLRNQNAR EKGFSLGAFE ERYVLSQPVA VVRREGRILA FATLMCPDVL RIEASVDLMR YRTSVPPGTM DFLFGKLILH FQAAGYQRFG LGMAPMSGMV EHQLAPRWHR FGRMMFRHGA RFYNFRGLRN FKDKFEPVWE PRYLLARGGL APLFTLTDVA ALIGGGLKGV ISK
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