Gene RS04776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS04776 
SymbolRSp1347 
ID1223659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand- 
Start bp1698945 
End bp1700030 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content65% 
IMG OID637241210 
Product4-hydroxyphenylpyruvate dioxygenase oxidoreductase protein 
Protein accessionNP_522906 
Protein GI17549566 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR01263] 4-hydroxyphenylpyruvate dioxygenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAA CTTTCTCCGT TCCTAATTTG CATGCGGAGT GGCCGATGCG TACCGTGACG 
ACAGCAGGTT TTGCCTTTGT CGAGTTTGTC TGCCCGGAGC CCGAAGAGCT GGTTGCCCTG 
TTCGGGAAGC TCGGGTTCAA GGCACAGGGG CAACATGCGC AGACGGGGGC GGTTCTCCTG 
CGCCAGAACG AAGCGGCCCT GATCGTGAAC CCCGCGCCGA ATCCGTTCCG CGATGTTCAC 
GGCGCATCCG CGCGGGCGAT CGCGATCCAC GTGGACGACG CAGCGAATGC CCTGGCGCAG 
GCGCTGGCCG GTGGCGCCCG TCGGGCAACA CCGGCCGAGT GCGGCGCGTT CGTCGTCGAT 
GCGCCGGCGA TCGTCGGCAT TGGCGACAGC CTGGTCTACT TCGTCGATCA CGACATCGAA 
TCGGCGTTTT CGACGCCGTA TCGGCCAGGG CAGCCCATCG CGGTGGCGGA GGCCGCCATC 
CAGTCGATCG ACCACACCTC GAACATCGTC AAGCCGGAGA ACCTCGACCA CTGGGCCGAC 
TTCTACAAGG ACACCTTTGC CTTCGTCCAG AAGCAGTACC TGGACGTGAA AGGCCGGCAG 
ACGGGGATGC GCGCGCGCTC GATGGTGAGC CCGTGCGGAA AGGTGTCGAT CCCGATTGCC 
GCCGCCGCGC ACGACCAGCC CGGCGTGCTG AACCAGAACG ACGAGTTCAT CCGCGACTAC 
CGCGGTGAGG GCATCCAGCA CATCGCTTTC CTGTCTTCGA ACATCGAGCA GACCATCGCG 
GCCATGGAAA CCGCCGGCAT CGAGTTCATG GAGACGCCGC CCAAGACCTA CTACCAGAAC 
CTGGATGGTC GGGTTCCCGG TCACGGGCAG AACCTCGACA GCATGGAGCG CCGGGGCATT 
CTCGTCGACG GCAAGGGCGG CGGCCGGATC CTGCTGCAAC GCTTCACGCG CCGCCAGATC 
GGCCCGATGT TCTTCGAGAT CATCGAGCGG CGCGGCGAGG ACGGTTTCGG CGAAGGCAAT 
TTCAAGGCGC TCTTCGAATC CCAGGAGCAG GACCAGGTCC GGCGCGGGTC GTTGAACGCC 
GCGTAG
 
Protein sequence
MKQTFSVPNL HAEWPMRTVT TAGFAFVEFV CPEPEELVAL FGKLGFKAQG QHAQTGAVLL 
RQNEAALIVN PAPNPFRDVH GASARAIAIH VDDAANALAQ ALAGGARRAT PAECGAFVVD 
APAIVGIGDS LVYFVDHDIE SAFSTPYRPG QPIAVAEAAI QSIDHTSNIV KPENLDHWAD 
FYKDTFAFVQ KQYLDVKGRQ TGMRARSMVS PCGKVSIPIA AAAHDQPGVL NQNDEFIRDY 
RGEGIQHIAF LSSNIEQTIA AMETAGIEFM ETPPKTYYQN LDGRVPGHGQ NLDSMERRGI 
LVDGKGGGRI LLQRFTRRQI GPMFFEIIER RGEDGFGEGN FKALFESQEQ DQVRRGSLNA 
A