Gene RS03920 details

Gene Information

• Locus tag: RS03920
• Symbol: RSp0559
• ID: 1222866
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: +
• Start bp: 701293
• End bp: 703251
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637240419
• Product: putative transmembrane protein
• Protein accession: NP_522120
• Protein GI: 17548780

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCCGAA ATGGCATCGG GGAGACGACC GTGAAATACT TATCCATGTT CAGGCAGCCA 
TGCAGCGTAA TGCTTATTGG CGTTATCGTC TCAGCAACGC TAATTTCGAC GCCGGTCATG 
GCTCAAAATC AGCCCCAGGT GCCCAAGCCT GTGGAGCAGG AGAAGGCGTC AGCGCCAGAC 
CATGCCTTGG CTGTGGAGCG GGAGAAGTGG CGTAAGGGGA TGCTGCTGCG GCCCCGACCC 
GTGAAAGGAT GCTTCACCGC GACTTATCCC GACACCGAGT GGCGCGAGAT ACCCTGCCTT 
CCGCCGCGGC CCACCAAGCC CTATCCGCCG CGCAGTACGG GGACGACCAA TCTCGAAACC 
GTTGGCGGCG CGGGCCCGGA TTTTACCGGG TCCGTGACCG GCCACATCTC GCAGGCCGAG 
GGCTCGTTCG ACAGCGCCGC AGGCATCACA ACCACCGGCG CTTACTCGCT CCAACTCAAT 
ACGGCACCCT TCGATACATC GGCGTGCGGC GGTTCTCCTA ATAATACCCA CGTACTTGCA 
ACCGGATGCC GCGGCTGGGA GCAGTTCGTC TACGACTCAA GCGGAACCGC GAGTATTCAA 
TACTGGTTGC TCGACTATGG ACCGGTCGGC ACTTCCTGCC CCGCGCCGGT GCACGCGAAT 
TGCGCGGCCA ACGCCGTCTA TACTGACGGA TGGTGCCCTT TCAACATTTC GTTGTTCGCG 
GGCGATGCCA ATCCCATTCA GTGCGCCATC AACTCCAGTT TGGTAGGCGC GCCTGCGCAA 
GCCCTGACCG GCGTTGGCAA TCTCAAAGTT TCCGGGTCCG CTGGGGGCGC GAATGATTCG 
ATGGTCGTCT CAGTCAGCGG TACACCTACT CTAGTGACGG GAGCCAACCA TTTCCCCGAC 
CTCGGCAGCC AATGGAACGA GGCCGAATTC AACGTCTTTG GCCCTGGTTC CAACGCAACA 
GTGACCTTCA ACAGCGGCAC GAACATCGTC GTGCGCACGG AAGTGATCAG CGGAACAACT 
GCGGGGCCCG GTTGCCACAT GCGGTCCTGG ACCGGCGAAT CCAACAACCT CAGCCTGGGC 
ACTTCGCCAG TGGCATCGCC TGCGCCGCTC CCGGCACCGG CGCTCGTGTT CTCCGAGAGC 
AATCCAGCAC CATCGGGTAC ACCTTCCTGC GCGGATGCGG ACAGTTTGGG CGACACGCAT 
CTGCGGACAT TCGGCGGCCT TCTTTATGAC TTCCAGGCGA CGGGAGATTT CGTGCTGGCG 
GAAACCGACC GCGACTTTCA AGTTCAGACG CGGCAGGTCT CCGGTGCGCC CAGTTGGCCG 
AATGCGACGG TGAACAGGGC CGTCGCTGTG CGGGCCGGCA AAGACCAAGT CGCCATGTGT 
CTACCCGGAC GCGTCATGGT CAATGGCAGG CCGGCGACCA TTCCAGATGG TGGTCACCTT 
GCCCTTGCCG GCGGCGGCGC TGTGTTCCGG AAAGCGAATG CCTTCACGGT TTTGGCGCCG 
AGCGGCGACA GCGCCCGTGC CGAAATGAAT GGCGCCTACA TCAACGTGTC GGTGGGTCTT 
GGGAATTGGC CCAGCAAAGT GCGCGGCTTG GTTGCCAATG CCAGTGGAAA AGTGAACGAA 
GTCGTGGCCC GGGACGGCGT GGTACTGAGC AGCCCGTTTG CCTTCGAGAG CCTTTACGGC 
CATTACGCAG AAAGTTGGCG CGCGGCTCGG GAGGAGTCGA TGCTCGGGGC CTGCGGCGAG 
AACATTCTGC ACGGCGTGCC CAAGAAGTCG TTCTCCGCAA CTGACCTGCC GCCAAAATTG 
GCCACACGCA ACCGGCTCAT CTGCACCCGT GCCGGCGTGA AAGAAGGGCC ACTCTTGGAT 
GCCTGCGTGA TCGATGTCGC ATGGCTTGGC GCCAAAGCGG CCACGACGTT TGCGGGTAAG 
CCTGCGCCGG TAGCCGTCGG CGATGAACGG CGTAGGTAA 

 

Protein sequence

MSRNGIGETT VKYLSMFRQP CSVMLIGVIV SATLISTPVM AQNQPQVPKP VEQEKASAPD 
HALAVEREKW RKGMLLRPRP VKGCFTATYP DTEWREIPCL PPRPTKPYPP RSTGTTNLET 
VGGAGPDFTG SVTGHISQAE GSFDSAAGIT TTGAYSLQLN TAPFDTSACG GSPNNTHVLA 
TGCRGWEQFV YDSSGTASIQ YWLLDYGPVG TSCPAPVHAN CAANAVYTDG WCPFNISLFA 
GDANPIQCAI NSSLVGAPAQ ALTGVGNLKV SGSAGGANDS MVVSVSGTPT LVTGANHFPD 
LGSQWNEAEF NVFGPGSNAT VTFNSGTNIV VRTEVISGTT AGPGCHMRSW TGESNNLSLG 
TSPVASPAPL PAPALVFSES NPAPSGTPSC ADADSLGDTH LRTFGGLLYD FQATGDFVLA 
ETDRDFQVQT RQVSGAPSWP NATVNRAVAV RAGKDQVAMC LPGRVMVNGR PATIPDGGHL 
ALAGGGAVFR KANAFTVLAP SGDSARAEMN GAYINVSVGL GNWPSKVRGL VANASGKVNE 
VVARDGVVLS SPFAFESLYG HYAESWRAAR EESMLGACGE NILHGVPKKS FSATDLPPKL 
ATRNRLICTR AGVKEGPLLD ACVIDVAWLG AKAATTFAGK PAPVAVGDER RR