| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03890 |
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| Symbol | RSp0589 |
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| ID | 1222896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 723622 |
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| End bp | 724452 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637240449 |
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| Product | short chain dehydrogenase |
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| Protein accession | NP_522150 |
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| Protein GI | 17548810 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.606349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACA GACGAAAGAA GACGGCGCTC GTGACTGGCG CATCCTCTGG TATGGGCAAG
GAAATCGCGA AGCGCCTGCT TGCAGACGGT TTTCAGGTCT ACGTTGCGGC GCGCAGCGTG
GACAAGATGA GCGACATCGC GGATCTTGGG GCAATACCTG TGCGCATGGA CATCTCGAAG
GATGAGGAGA TCACGGCGGC AGTCGATACC ATGCTTCGGG CAGTAGGCCG TGTGGACGTG
CTGGTGAACA ACGCCGGTTT CGGGTTGTAT GGCCCGATTG AGGAGGTTGG CATTGACGAG
GCTCGATACC AGTTCGAGGT CAACGTCTTC GGTGCCGCCC GCCTGACGCA ACTCCTGCTC
CCAGCGATGC GGAAGAGCGG TGCGGGGACG ATCGTGAACA TCACGTCGAT GGGCGGCAAG
ATCTACACGT TGCTTGGGGG CTGGTATCAC GCGACCAAGC ATGCGCTTGA GGGCTGGTCG
GATTGTCTGC GGCTCGAGCT CGCGCCCTTT GGTATCAATG TCGTGGTCGT CGAGCCTGGG
TTGATCGAGA CGGGGTTCGG CGACGTGGTC GCCGATGGTC TGCTCAAGCG ATCGGGCAAT
GGCGCGTATG CGAAGCTGAC GCACGCGGTC GCCAAAGCGA CAAAGGACGC CTATGGGCAA
GGGCGCGGCA CCGATCCGAG CGTCATCGCA GGTATCGTGT CCAAGGCGGT TGCGGCAAAG
CAGCCGCGCA CCCGCTACGT CGCCGGCAAG TACGCCAAGC CGATGATCCT GATCCGAAGC
TGGCTTGGCG ACCGCTTGTT CGATCGCATG ATCATGAGCC AGATGCGATA G
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| Protein sequence | MSDRRKKTAL VTGASSGMGK EIAKRLLADG FQVYVAARSV DKMSDIADLG AIPVRMDISK
DEEITAAVDT MLRAVGRVDV LVNNAGFGLY GPIEEVGIDE ARYQFEVNVF GAARLTQLLL
PAMRKSGAGT IVNITSMGGK IYTLLGGWYH ATKHALEGWS DCLRLELAPF GINVVVVEPG
LIETGFGDVV ADGLLKRSGN GAYAKLTHAV AKATKDAYGQ GRGTDPSVIA GIVSKAVAAK
QPRTRYVAGK YAKPMILIRS WLGDRLFDRM IMSQMR
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