| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03889 |
|---|
| Symbol | RSp0590 |
|---|
| ID | 1222897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 724530 |
|---|
| End bp | 725549 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637240450 |
|---|
| Product | transcription regulator protein |
|---|
| Protein accession | NP_522151 |
|---|
| Protein GI | 17548811 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.627641 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGAG CCCGGGCAGA CCGCTGTAAA GTCCCGCAGG CCTTCTGGCT TACGATCGAG
CGTATCGGGC TGCCGCCGGC CGCGCTGCTG CGGCAAGCCC GTCTCCCCGG AGCCTTGCAC
CTGAATCGGC AGGGATTTGT CACCACGGCG CAGTACTTTG CGCTGTGGCG GGCGCTTGAG
GATTTGGTGC CGGAGCCCGG CATCGGCATC AAGCTAGTCG AAGCGGCCAA TACGGCGGTG
CTTCCGCCAT CGAACCTGGC GGCATTTCAT GCGCGGAACT ATCGCGACGG GCTTGACCGG
ATCGCCCGCT TCAAGCGGTT GTGCACGCCT GAGCAGTTGC ACTTTACCGA GGAGAATGGC
GAGTTCACGA TGACGACCGA GTGGTTATAC GCGACAGAAC TGGAGCCTGC TGTCGCAACG
GATGTGACCT TCGCCTCTTT GGTTGAGCTT GGGCGCAGAG GCACAGGGCA GTGCCTAACG
CCTCGTCGCG TGCAGTTCGT ACGTCCTGAC CCGAAGGTCG ACATCCATCG CGCCTATTTT
GGTTGCCCGG TCCGCTACGG CGCTTCCCAC AATGTGCTGA CCCTGAAGTC AGCTGACTTG
GATCGTCCTT TCCCAGGCCA CAATCCGGAG CTCCTTGAAA TGCTCACGCC AGCGCTGGCC
TCAGCGCTTG GCGAACTCGA TGCGCATAGT TCGATCCGGG AGCAGGTCAA GATCGTTCTC
AAGCGGAGCC TGGCGAGCGG CCGACCGGAG CTGCTGGACG TGGCACGCGA ACTCGGAATG
AGCGAGCGTA CGCTACAACG TCGCATCACC GATGACGGTG GATCCTTCCG AGGCATCCTG
ATTGAAGCGC GACAAGAGCT GGGGCGGCAA TTGTTGGCCG ATCCGTCCGC TGACATCGAG
GAGGTGGCGT GTCTGCTGGG CTATCAGGAT ACGAGCTCGT TTTATCGAGC TTTCAGAGGC
TGGGAGGGTG TGACACCCAA CCGGTGGCGG GAGCTCAACA GCAATGGGCC GGCGGTGTGA
|
|---|
| Protein sequence | MSGARADRCK VPQAFWLTIE RIGLPPAALL RQARLPGALH LNRQGFVTTA QYFALWRALE
DLVPEPGIGI KLVEAANTAV LPPSNLAAFH ARNYRDGLDR IARFKRLCTP EQLHFTEENG
EFTMTTEWLY ATELEPAVAT DVTFASLVEL GRRGTGQCLT PRRVQFVRPD PKVDIHRAYF
GCPVRYGASH NVLTLKSADL DRPFPGHNPE LLEMLTPALA SALGELDAHS SIREQVKIVL
KRSLASGRPE LLDVARELGM SERTLQRRIT DDGGSFRGIL IEARQELGRQ LLADPSADIE
EVACLLGYQD TSSFYRAFRG WEGVTPNRWR ELNSNGPAV
|
|---|
| |