| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03754 |
|---|
| Symbol | RSp0613 |
|---|
| ID | 1222920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 744909 |
|---|
| End bp | 745556 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637240473 |
|---|
| Product | transcription regulator protein |
|---|
| Protein accession | NP_522174 |
|---|
| Protein GI | 17548834 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.727658 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCCA TCACCCAATG TGCCCCCGAC ATGTCCCGCG TCAAGAACGA AGACGAATTC
GAACTCCGCC GAGAAAGCGT GCTCGACACC GCCGCCGAAG CCTTCGCCGC GGACAGCTAC
GCGAGCGTGT CGATGAACCA GATCGCCGCG GCCTGCGGCG GCTCGAAATC CCGCCTGTAT
CACTACTACG AAGGCAAGGA AGCCATCCTG TTCGACCTGC TGGACCGCTA CACCCGGCGC
CTGGCCGACC TGGTCGAACG CGCCGAGCGC GACGCGCTCC ACGCCAGGCT GTCGGCGCGC
GCCACGCTGC ACCTGCTGAT CCGCACCTTC CTGGCCGAGT ACGCCACCTC GCGCACGCGG
CACGTGGCGC TGCTCAATGA CGTGAAATAC CTGTCGCCCG AACAGCGCGA CATCATCCTG
GCGCGCGAGC GCGAAGTCGT CGCCGCCGTC GGCCGCCAGC TCGCCGCGGC CTACCCCGGC
AAGGTCGACG ACGCCAACCG CACGCCGGTC ACGATGATGG TGTTCGGGAT GATGAACTGG
ACGTTCACAT GGCTCAAACC CGATGGGCCG CTGTCGTACG AAGGCTATGC CGAGATGGTG
ATTGAGATGC TGGAGAATGG GTTGGGTGGG GGTAAAACGC AATCCTAG
|
|---|
| Protein sequence | MAAITQCAPD MSRVKNEDEF ELRRESVLDT AAEAFAADSY ASVSMNQIAA ACGGSKSRLY
HYYEGKEAIL FDLLDRYTRR LADLVERAER DALHARLSAR ATLHLLIRTF LAEYATSRTR
HVALLNDVKY LSPEQRDIIL AREREVVAAV GRQLAAAYPG KVDDANRTPV TMMVFGMMNW
TFTWLKPDGP LSYEGYAEMV IEMLENGLGG GKTQS
|
|---|
| |