Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03737 |
Symbol | RSp0630 |
ID | 1222937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 768372 |
End bp | 770330 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637240490 |
Product | phospholipase protein |
Protein accession | NP_522191 |
Protein GI | 17548851 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.361458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATA AACCCATCGT GACGCCGCTG GCGCTGTCCC GCACCCGTAC CGCCACGCTC ACGCTGCCGT GGTTCGTGCA ACATACCGAA TACGACTCCG CACAAGCGAC GTTTCGCCCG CTGGTGAACG GCGAGGAGGC GTTTGGCGCC GTCTATGACG CCATCGCCGC CGCCAAGCAC AGCATCGACA TCATCTGCTG GGGCTTCCAG CCCTCCATGT ACTTCAAGCG GGGCAGCGGC GCCCAGGACA CCTTACCGAT CGGCGATCTG CTGGAAGCCA TGGGCAAGCG AGGCGTCAAG GTGCGGCTGT TGGTGTGGAG CGATAGCCTG CATCTGGCCC AGTTCTTCGA GAACATGACG CCCGGCAACA ACGTCGCCTC GTACCGGTCG GACACGCGCA ATTCAACGCA GCGCGAATTC GACCAGCTCT GGTACTGGCG TGCCAATTTG AACAACGTCA CCAAGGGTTC GGCGGCGAAG TGGTTGATGC CGGGCGGCGC CATGCAGGAG ATTGCCAAAG CCATCCGCAA TCACGCGCTG CGCGACAAGG CCCTGACCAA CGTGGAATTC GCCACGCGCG ACTTTGACCT CGGTGAACGG GCGGAGATCG CCTGGCGCAC CTGGACGCAG GGCAAGGATA CCGGGCGCAG CACGTTCACC AAGGACGCCA ATGCCGCCGC CATGGCCGGC GAGCCGTCCC ATCATCAGAA GATGGTGCTG GTCGACTACG AGATGCCGGA GCGGGCCGTG GGGTTCGTGA TGGGGCACAA CACGCTCGAC GCGTACTGGG ACCGTGACGA TCATGGTTAC ACGCGCATGC ATCCTCAAAT GGGGCGCAAC GACCATCACC CACGCCAGGA TATGTCGAGC CGGGTTACCG GCCCCATCCT CCAATACCTG AACCGGAATT TCTGCCAAGC ATGGAGTGAC GCGACGGGGC AACAGCTGGA GGCAGGGAGG GCGGTGATCG CAAGCCAGCT CAAGCTGCGT CGCGACTTCG ACACGCCGGT CATGGCGCAG ATCCTGCGAA CGCAATCGCA GCACGGCAAG CGCGACATCG AGGCGATGTA CCTGCAGGCG GTGAACAACA CGACGAACTT CGTCTACATC GAGAACCAGT ATTTCCGGTT CCCGCCGCTG GCCGACAAGA TCAAGGAGGC GGCCAAGGCC CAGTTTGGCG CGGGGCGAGA CCAGGGCAAG CATGGTTCGC TGCATCTGTT CGTGGTGACC AACTCGAACG ATGATGGGAT CGGCCTGGGG ACGGTCAATA CGTACCGGAT GCTGGAAGCG CTGGGGCGGG CCGATACCCT GCCCGGCGTC GCCACATTGG AGCGGGAAGA CGCGCGCCAA GCATCATTGG GCAAGCAGCG CGCGCAAGCG ATCGATCAGC AGAATCAGGC CAATCAGGTC ATTGAAGACG CGAACGCGTT CCTCAAGACC GAGGACACGG CGTCCACGCG GCAATGGTTG GCAGACGCGC AGCAGAAGCT CAAGCGGGCC ACGGCCAAGC GGGCCGAGCT AGAGGCGGAG ATGAAGAAGA CGCTGCCGAA GACCATCCAG TCCGTGAAGA TCGACGGACT GGAAGTGCAC ATTTGCACGC TGGTTGCCCC GGACTCGCCG CCGAACAATT GGGACTACGT GTATGTGCAC GCGAAACTGA TGATCGTGGA TGATGTGTTC ATGACGCTGG GCTCGGCCAA CATCAACACG CGCAGCATGC AGGTCGACAG CGAATTGAAC ATCTGCCATG AGCATTCGGG GGTGACTGCG CCGCTGCGCA AGCGGCTGTG GAACATCCAC ACCAAGGGGA TGGGGGCGCA GGAGGATGTG ACGGAGGCGT TCGACCAATG GGACAGAATC ATCGTCGAGA ATGCAAAGAA CGAGCGCAAC AAACTGCCCC CCTGTGCCTC CCTTGTTGGC TTCATGCGCG AATCGGACAA GCGCAGCTAC CTAGACTGA
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Protein sequence | MANKPIVTPL ALSRTRTATL TLPWFVQHTE YDSAQATFRP LVNGEEAFGA VYDAIAAAKH SIDIICWGFQ PSMYFKRGSG AQDTLPIGDL LEAMGKRGVK VRLLVWSDSL HLAQFFENMT PGNNVASYRS DTRNSTQREF DQLWYWRANL NNVTKGSAAK WLMPGGAMQE IAKAIRNHAL RDKALTNVEF ATRDFDLGER AEIAWRTWTQ GKDTGRSTFT KDANAAAMAG EPSHHQKMVL VDYEMPERAV GFVMGHNTLD AYWDRDDHGY TRMHPQMGRN DHHPRQDMSS RVTGPILQYL NRNFCQAWSD ATGQQLEAGR AVIASQLKLR RDFDTPVMAQ ILRTQSQHGK RDIEAMYLQA VNNTTNFVYI ENQYFRFPPL ADKIKEAAKA QFGAGRDQGK HGSLHLFVVT NSNDDGIGLG TVNTYRMLEA LGRADTLPGV ATLEREDARQ ASLGKQRAQA IDQQNQANQV IEDANAFLKT EDTASTRQWL ADAQQKLKRA TAKRAELEAE MKKTLPKTIQ SVKIDGLEVH ICTLVAPDSP PNNWDYVYVH AKLMIVDDVF MTLGSANINT RSMQVDSELN ICHEHSGVTA PLRKRLWNIH TKGMGAQEDV TEAFDQWDRI IVENAKNERN KLPPCASLVG FMRESDKRSY LD
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