| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03674 |
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| Symbol | RSp0290 |
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| ID | 1222422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 376824 |
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| End bp | 378290 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637240150 |
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| Product | putative outer membrane CHANEL lipoprotein |
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| Protein accession | NP_521851 |
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| Protein GI | 17548511 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.119855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGTA AGCCGAACCC ATGGATTGAA CGCGCGCGGT GGTGGCTGCT GCTGGGCAGC
CTCTGCTGCG GGGGGGTCTC CACCCAGGCA TGGGGACACA GCCTCGGCGA CCTGGTGGAC
GACCCGCTGT TCGCGCGGCC ACCGGTGCTC GACACGGGCG CCGTGCTGCC GTCCGACGCC
CAGCCGATCC CCTGCCCGGC TTCCGGTGAC CTGGCGCACC CGCTCTCGCT GAGCGAAGCG
GTGGACCTGG GGCTGTGCAA CAACCCGCAG GTCAAGGCGG CGTGGGCCGC CATCAAGATC
CAGGCCGGCG CGGTCGGCGA AGCCCGGGCG GCCTATCTGC CGACGCTGAC GGGGTCGCTA
TCGGCCATGC ACACGCGCAA CGAGTTTCCC GATCGGCCGG AAGCGAACTC GACCTCCAAT
GGACATACCG TCTATCTCGG CCTCAGTTGG CGGCTGTTCG ATTTCGGTGC CCGCAGCGCG
AACCGCGAAG CCGCCAACCT GCTGCTCGCG GCGGCCATCT CCGGGCACGA CGCCGCCCTG
CAGAAGGTGC TGGCCTCGGT CGTCGGCGCG TACTTCGATG CGCTGACCCA GCAGGCCGCC
ATGCAGGCCC GAACCGAGGC GACCCGCCTG GCGCGGGACA CCGTTGAAGC GACCGAGCGG
CGCGAGCGCC GCGGCGCCGC CGGACAGAGC GACACCCTGC AGGCGCGCAC CGCGTTCGCC
AAGGCGCAGC TGGCCGAACA GCGCGCCGTG GCGGATTTCC GCAAGGCGCT GTCGGCGCTC
GCCTACGCCC TGGGCTTGCA GCCGGGCACG GCGTTCCAGC TGGCCGAGCT GAACGACGCG
ACCGACAGCC AGTCCGTCGG CGAACTGGCG CGCTGGCTGG ATGAAGCCGC GGCCCGGCAT
CCCGGCATTG CCTCGGCGCG CGCCCAGTGG GACGCGGCCA ACGCCCGGGT TGCCAAGACA
CGCGCCGAAG GCCTGCCGAC CATCGACCTC ACCGCCAACT TCTATCAGAA CGGCTACCCG
AACCAGGGCC TGCAGAGCAC GCGCAACAAC GTGAGCACGG TCGGCCTCAC CCTGACGATC
CCGCTGTTCG AAGGCTTCGC CCGCACCTAC AAGATCCGCG GCGCCGAGGC CCAGGCCGAA
CAAAGCGAGG CGCAGTACGA AGACACGAAG AACCAGATCC TGTCGGATGT GATCAAGGTG
CACGCCGATG CCGTGGCGGC CGTCGACAAC CTGCGCGCCT CGGACGTGCT GATCCGGTCG
GCCCAGGCGT CGATGGTGTC ATCGGAGAAG CGCTACGCCA AAGGAGCGGC GGATGTGCTG
GAGCTGCTGT CGACGCAGTC CGCCCTGATG GACGCGATGC AGGAGCGCGT GCGGTGCCTG
TCCGAGTGGC GCGCCGCGCG GCTGCGGCTG ATGGCCACCG CCGGGGTGCT GGGGCGGGAG
CGGCTGGACA ATCCGCTGGT CCGCTGA
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| Protein sequence | MSGKPNPWIE RARWWLLLGS LCCGGVSTQA WGHSLGDLVD DPLFARPPVL DTGAVLPSDA
QPIPCPASGD LAHPLSLSEA VDLGLCNNPQ VKAAWAAIKI QAGAVGEARA AYLPTLTGSL
SAMHTRNEFP DRPEANSTSN GHTVYLGLSW RLFDFGARSA NREAANLLLA AAISGHDAAL
QKVLASVVGA YFDALTQQAA MQARTEATRL ARDTVEATER RERRGAAGQS DTLQARTAFA
KAQLAEQRAV ADFRKALSAL AYALGLQPGT AFQLAELNDA TDSQSVGELA RWLDEAAARH
PGIASARAQW DAANARVAKT RAEGLPTIDL TANFYQNGYP NQGLQSTRNN VSTVGLTLTI
PLFEGFARTY KIRGAEAQAE QSEAQYEDTK NQILSDVIKV HADAVAAVDN LRASDVLIRS
AQASMVSSEK RYAKGAADVL ELLSTQSALM DAMQERVRCL SEWRAARLRL MATAGVLGRE
RLDNPLVR
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