Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03158 |
Symbol | RSp1214 |
ID | 1223526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1544899 |
End bp | 1545546 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637241079 |
Product | hypothetical protein |
Protein accession | NP_522775 |
Protein GI | 17549435 |
COG category | [S] Function unknown |
COG ID | [COG3644] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.284088 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCCG CAGCAGTTCG TGCTTGTACA GCGTTCACCG GTTCGCGCCG CCTGGCCGCC GGCTCCGTCC GGGACGTGGC CACGGCCGTC AAGCTGCATC TGGACGCGTA TCCCGAGGCG CGGGTCCTGG TGTTCGACAA TGCGACTGCG TGCCCGGTGG AATTCGACCT CCGCGGCACC GCCGAGGCGG TCGCGGCCCG GCTCGATGGG GCGGCCGATG CCGACGCCGA TGCACGCGAG CCGTCCACCC GCCCGCGCGG CCCCGGCCGC CCCAAGCTGG GCGTGACCGC CCGCGAAGTC ACGCTCCTGC CGCGCCACTG GGACTGGCTC GCGGCCCAGC CCGGCGGCGC CTCCGTGACC CTGCGCAAGC TGGTGGAGGC GGCCAGCCGC GCGGCCGAAG GTCCGGACCG CCGCCGCAAT GCGCAGGAGG CCGCTTACCG CTTCATGTCG GCCATGGCCG GCGATGCGCC CGGCTTCGAA GAGGCCACGC GCGCGCTGTT CGCGGCGGAC GCGGGTCGCT TTGCCGCCTT GACCCAGCCC TGGCCGGCCG ACGTGCGCGA TTTCGCGCGC GAACTGGCGC GCGGCGCGTT CGAGACGGCC ACCGCGCCGG CCGATGCGCC GTCCGCCTCC CACGAGGCGG TCACATGA
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Protein sequence | MDAAAVRACT AFTGSRRLAA GSVRDVATAV KLHLDAYPEA RVLVFDNATA CPVEFDLRGT AEAVAARLDG AADADADARE PSTRPRGPGR PKLGVTAREV TLLPRHWDWL AAQPGGASVT LRKLVEAASR AAEGPDRRRN AQEAAYRFMS AMAGDAPGFE EATRALFAAD AGRFAALTQP WPADVRDFAR ELARGAFETA TAPADAPSAS HEAVT
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