| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03151 |
|---|
| Symbol | RSp1207 |
|---|
| ID | 1223519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 1535683 |
|---|
| End bp | 1537131 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637241072 |
|---|
| Product | putative transmembrane cytochrome bd-II oxidase (subunit I) oxidoreductase protein |
|---|
| Protein accession | NP_522768 |
|---|
| Protein GI | 17549428 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.014009 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAGG TGTCAGTGAC ATTCGACGCT CTGCTGTTGT CGCGCGTGCA ATTTGCCTGG
GTGGTGGCGC TGCATATCCT GCTGCCGGCG TTCACGGTGG GCCTGTCGTG CTTCGTGGCG
ACGCTCGAGG TGCGCTGGTG GATCACCAAC GACGACGTGT TCCGCCGCCT GTCCACGTTC
TGGACCAAGA TCTTCGCGGT GTCGTTCGGC ATGGGCGTGG TGTCGGGCAT CGTGATGCCG
TTCCAGTTCG GCACCAACTG GAGCCGGTTT TCCGATGCCG CCTCCAACGT GATCGGCTCC
CTGATGGGCT ACGAGGTGAT CACGGCCTTC TTCCTGGAGG CGGGCTTCCT GGGGGTACTG
CTGTTCGGGC GCAAGCTGGT GCCGCAGTGG GCCCACGTGC TGTCGGCGGT GATGGTGGCG
CTCGGCACGG TGCTGTCGTC GTTCTGGATC CTGGCGGTCA ACAGCTGGAT GCAGACGCCG
GTCGGCTTCG AGGTCGTCGA TGGCCGCTAC TTTCCCACCG ACCTGCTGGC GGTGATCTTC
AATCCCTCGT TTCCGTATCG CCTGGTGCAT ACCGTGACGG CCTTCGTGGT GACCACGGGC
TTCGTCGTGC TGGCCGTGGG CGCGTATTAC CTGCGGCGCG GGCGCTTCGT GGACGAGAGC
CGCATCATGG TGCGCATGGC GCTGTTCTTC CTGGCGGTGA TGGTGCCGCT GCAGATCGTG
GTCGGCGACC TGCACGGGCT GAACACGCTG GAGCACCAGC CCGCCAAGCT GGCTGCAATG
GAAGGACTGT GGGAGACGCG CACGCACGCG CCGGCCTCGC TGTTCGCGAT TCCCGATGCG
CAGGCCGAGA CCAACCGCTA CGAGATCGCC ATCCCCGCGC TCGGCAGCCT GTACCTGACC
CACCGCTGGG ACGGCGAGGT CAAGGGCCTG AAGGATTTCC CGCGCGAAGA CCGGCCGCCG
GTGATCATCG TCTACTTCGC GTTCCGCATC ATGGTGGGCG TCGCCATGCT GATGCTGGCC
CTGGTGGCAT GGGGCCTGCT GCTGCACCGG CGCGGCAGGC TGCTCCAGGC CGATGCGTAT
CTGCATGCGG CGACCTGGGG CGCGCCGCTG GGCTTCATCG CCGTGCTGGC GGGGTGGACC
ACCACCGAGG TCGGCCGCCA GCCCTGGGTG ATCTACGGGC ATTTGCGCAC CGCCCAGGGC
GTCACGCCCT CGCTGACGGC GGCCGACGTG GCGCTGTCGC TGGCCGGCTA CATGCTCTGC
TACCTGGTGA TCTTCGGCGG CGGGCTGACG CTGCTGCTGC GGCTGGCGCG CGGCGGCCCG
GGCGGGCACA ACGTCGAGGA GCCGGAATTC ACGCCGCACG AGCGTCCGGC CCGTCCGCTG
TCCGCCGCCG GGGAGTCCGA CGAGGCGGGC CATCCACCTC ATCCGCGCGG AGGCCCCGAT
GCTGCTTGA
|
|---|
| Protein sequence | MLEVSVTFDA LLLSRVQFAW VVALHILLPA FTVGLSCFVA TLEVRWWITN DDVFRRLSTF
WTKIFAVSFG MGVVSGIVMP FQFGTNWSRF SDAASNVIGS LMGYEVITAF FLEAGFLGVL
LFGRKLVPQW AHVLSAVMVA LGTVLSSFWI LAVNSWMQTP VGFEVVDGRY FPTDLLAVIF
NPSFPYRLVH TVTAFVVTTG FVVLAVGAYY LRRGRFVDES RIMVRMALFF LAVMVPLQIV
VGDLHGLNTL EHQPAKLAAM EGLWETRTHA PASLFAIPDA QAETNRYEIA IPALGSLYLT
HRWDGEVKGL KDFPREDRPP VIIVYFAFRI MVGVAMLMLA LVAWGLLLHR RGRLLQADAY
LHAATWGAPL GFIAVLAGWT TTEVGRQPWV IYGHLRTAQG VTPSLTAADV ALSLAGYMLC
YLVIFGGGLT LLLRLARGGP GGHNVEEPEF TPHERPARPL SAAGESDEAG HPPHPRGGPD
AA
|
|---|
| |