| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03150 |
|---|
| Symbol | RSp1206 |
|---|
| ID | 1223518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 1534683 |
|---|
| End bp | 1535693 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637241071 |
|---|
| Product | putative transmembrane cytochrome bd-II oxidase (subunit II) oxidoreductase protein |
|---|
| Protein accession | NP_522767 |
|---|
| Protein GI | 17549427 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
|---|
| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.73808 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0133752 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTTG ATCTCGTGCC CCTGTGGGCG GGCATCCTGG CCCTGGCCGT GCTGATGTAC
GTGCTGCTGG ACGGATTCGA CCTGGGCGTC GGCATGCTGT TCGGCATCCA TCCCGACGAG
GCGCACCGCA ACACCATGAT CGCCTCGGTC GCCCCGATCT GGGATTTCAA CGAGACCTGG
CTGATCCTCG GCGGCGGGGG CATGCTGGCG GCGTTTCCGC TGGCGTTCAC GGTCATCATG
CCGGCGCTGT ATTTCCCCAT CCTGATCATG CTGCTGGGGC TGCTGTTCCG GGGCGTGGCC
TTCGAGTTTC GCGAGGTGGA GGGCGCGCAC CGCCGCCTGT GGGACACCGG CTTCTATCTC
GGCTCGTTCA TCGCGACGTT CGCGCAGGGC GTGGTGCTGG GCAACTTCAT CACCGGCTTT
CCCGTGGAGG GGCGCCAGTT CTCCGGCTCC AGCTGGGACT GGGTCGCCCC GTTCCCGCTG
CTGACCGGCG TCGGCCTGAT CTTCGGCTAC GCGCTGCAGG GCGCGACGTG GCTGGTGATG
AAGACCGAGG GGGACTTGCA GGAATGGGCG CGCGTGCAGT CGCGCCGCTG CCTGTTCGGC
GTGCTGGCCT TCATCGTGAT GATCAGCATC TGGACGCCGC TGGCCGATGC CCGCATCGCC
GCGCGCTGGT TCAGCTGGCC GAACCTGCTG ATCTTCTCGC CGGTGCCGGT GCTGACCGCG
CTGCTGACGT GGTGGCTGTG GGATTCGCTG GACAAGCGGC GCGAGCTGGC GCCGTTCTTT
GCCTCGATCG GCCTGTTCTT CCTGGCCTAC ACGGGGCTCA TCATCAGCCT CTGGCCCTTC
GTGGCGCCGC CGCACATCAC GCTGTGGGAT GCCGCGGCCG GGCCCAAGTC GCAGGGCTTC
CTGCTGATCG GCACGCTGTT CCTGCTGCCG ATCACGCTGC TGTATGTGGT GTGGTCGTAC
TACGTGTTCC GCGGCAAGGT GCGCGGCGAC GTCGGCTACC ACCATCTGTA A
|
|---|
| Protein sequence | MLLDLVPLWA GILALAVLMY VLLDGFDLGV GMLFGIHPDE AHRNTMIASV APIWDFNETW
LILGGGGMLA AFPLAFTVIM PALYFPILIM LLGLLFRGVA FEFREVEGAH RRLWDTGFYL
GSFIATFAQG VVLGNFITGF PVEGRQFSGS SWDWVAPFPL LTGVGLIFGY ALQGATWLVM
KTEGDLQEWA RVQSRRCLFG VLAFIVMISI WTPLADARIA ARWFSWPNLL IFSPVPVLTA
LLTWWLWDSL DKRRELAPFF ASIGLFFLAY TGLIISLWPF VAPPHITLWD AAAGPKSQGF
LLIGTLFLLP ITLLYVVWSY YVFRGKVRGD VGYHHL
|
|---|
| |