| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03147 |
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| Symbol | RSp1203 |
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| ID | 1223515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1531022 |
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| End bp | 1532374 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637241068 |
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| Product | hypothetical protein |
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| Protein accession | NP_522764 |
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| Protein GI | 17549424 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.601264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.330645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTGAGG ATCACCATTT GTACAAGGCA GCGATCGAAC ATTCGCCGAT TGGAATCGGC
CTGTGTGCGC CGAAGGGTCG CTTCCTGGAC GTGAACCGTG CACTGTGCGC GCTGACCGGG
CACGAAGCCC AGGCGCTGCG CGCACGCGAC CTGTTCGACC TCTGCCACCC CGACTACGCC
GCCCGCACCC GCGAACGGGT GGAAGCCCTG CTGGCCGGCG AGCAGGATGC CCTGTCGCTC
GAGACCCGCT TCGTCCGGCC GGATGGCAGC ACCGTGTGGG TGCAGGCGGA TCTCGCGCTG
GCGCGGGCGG AGGCGGGCGA CGGCCAGGAC GGGCACCTGA TCGTCCAGGT GCAGGACGTG
ACGGCGCGGC GCCTGGCGCT GGAGTCGCTG CAGGCGTCCG AGCAGCGGCT GGCCTATGTG
CTCGACGGCG CCGGGCTCGG CACGTTCGAC TGGTCGATGC GGGTGCGCCA TGTCTCTTTC
AACCGCCGGA CCGCCGAGAT GCTCGGCTAT GCGCACGACG AGCTGTCGAC CGATCCGCAG
GACTGGTTCG CCATGGTGCA TCCGCAGGAT GCCGTCCTGA GCGTGCGCCG CATCTACCGG
CATCTGCGCG GCGACGCCGA CAGCTTCGAG GTCGAGCAGC GCCTGCGCAA CCAGGAGGGC
CAGTGGGTCT GGATGTCGGC GCGCGGGCGC GTGACCCAGC GCGATGCCCT CGGGATCGCC
GTGCGCGTGA GCGGCACGCT GCAGGACGTC ACCCGGCGCC GCGCCATGCT GGATCAGGCG
CACCATCTCG CGCTGCACGA TCCGCTGACC GACCTGCCCA ATGCCCGCCT GCTGCGCGAC
CGGCTGTTCG TCGCCATCCA GGCTGCCCGC CGCGCCGGCA GCCTGGTCGC CGTGGTGTTC
GTCGATCTGG ACCGCTTCAA GCCGGTCAAC GATGAATACG GCCACGGGGT CGGCGACCTG
GTCCTCAAGG CCACGGCCAT GCGCTTGCGC AGCGGCCTGC GCGCCTCGGA CACCGTCGCG
CGGCTGGGCG GCGACGAGTT TGTCGCCGTG CTCACGCACT GCCAGACGCG GGACGATGTC
GAGCAGACCG TCGAGCGGCT GATCGAGCAG CTGCAGGCCC CGTTCCGGGT GGAGGGGCAT
GTGCTGTCGA TGGGCGTGAG CGCCGGCGTG GCGCTTTACC CGTCGGACGG GCGCGATGCC
CAGACGCTGA TCCGCTGCGC CGACGCCGCG ATGTACGAAG TCAAGCGTGC CGGCGGCAAC
GATTTCGGCT TCCACGCCTC GCTCAACTAC GAGCGCCTGA TGAGCATGCG CCAGCGCGGT
CCTGATCCCG ACGGCGGGGC GGACGGGCGC TGA
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| Protein sequence | MLEDHHLYKA AIEHSPIGIG LCAPKGRFLD VNRALCALTG HEAQALRARD LFDLCHPDYA
ARTRERVEAL LAGEQDALSL ETRFVRPDGS TVWVQADLAL ARAEAGDGQD GHLIVQVQDV
TARRLALESL QASEQRLAYV LDGAGLGTFD WSMRVRHVSF NRRTAEMLGY AHDELSTDPQ
DWFAMVHPQD AVLSVRRIYR HLRGDADSFE VEQRLRNQEG QWVWMSARGR VTQRDALGIA
VRVSGTLQDV TRRRAMLDQA HHLALHDPLT DLPNARLLRD RLFVAIQAAR RAGSLVAVVF
VDLDRFKPVN DEYGHGVGDL VLKATAMRLR SGLRASDTVA RLGGDEFVAV LTHCQTRDDV
EQTVERLIEQ LQAPFRVEGH VLSMGVSAGV ALYPSDGRDA QTLIRCADAA MYEVKRAGGN
DFGFHASLNY ERLMSMRQRG PDPDGGADGR
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