| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03141 |
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| Symbol | RSp1197 |
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| ID | 1223509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1519171 |
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| End bp | 1520520 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637241062 |
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| Product | putative resistance transmembrane protein |
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| Protein accession | NP_522758 |
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| Protein GI | 17549418 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.704547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACG CCATGGACCC GAAGCCCGGC ACCCCCTACG CTGGACACGA TACCGTCTCA
CCGACGCTGC TGCCCCCGCC CCGCGCCGGC AAGCCGCGCC GCTGGATCCT CTGGGTGGTG
CTGGCCGTCC TGGTGCTGAT CGGCTATGCG ATCTTTCACG CGGTGCACCG CAGCACCGCC
GCCGGCAAGG GCGGCCCGGG CGGCCGCGGC GCCGCGATGA CGAGCGGCAA GCCGATGCCG
GTCATGGTCG CCACCTCGGG CAAGGGCGAT ATCAATGTCG TGCTGACCGC GCTGGGCAAC
GTCACCCCGG TCAACAACGT GACCGTCAAG ACACGTGTCG ACGGCCAGCT CGTGCGCCTG
GCCTTCACCG AGGGCCAGAC CGTCAAGGCC GGCGACCTGC TGGCCGAGAT CGACCCGCGC
GCCTACCAGG CCCAGCTCGC CCAGGCCGAA GGCCAGCTCG CGCGCGACAC CGCGCTGCTG
CAGAACGCCA GGCTGGATCT GCAGCGCTAC CAGACCCTGA TGGCGCAGGA CTCCATCGCC
AAGCAGCAGG TGGACACGCA GGCCTCGCTG GTGCGCCAGT ACGAGGGCAC GGTCAAGCTC
GACCAGGGCA ACGCCGACAA CGCCCGGGTG CAGCTGTCGT ACACGCGCAT CACGGCGCCG
GTGTCGGGCC GCGTCGGCCT GCGCCAGGTG GACCCGGGCA ACATCGTCCA CACGTCGGAC
ACCACCGGCA TCGTCGTCAT CACGCAGATC GACCCGATCA CCGTCATCTA CACCCTGCCC
GAAGACACCC TGCCCAAGGT GATGCCCCGG CTGCAGGCCG GCGACAAGCT GCCGGTGGAG
GCCTGGGACC GCGGCCAGAC CAACCTGCTC GCCCACGGCA CGCTGATGAC GGTGGACAAC
ACCATCGACA ACACCACCGG CACCGTCAAG CTGCGCGCGC AGTTCCCCAA CCAGAACGCG
GCGCTGTTCC CCAACCAGTT CGTCAACGTG CGCATGCGCG TCGACACGCT GCACGACCAG
GTGATCCTGC CGGGCGCGGC TATCCAGCGC GGCACGCAGG GCACCTTCGT CTACGTGGTC
GGCGCCGACG GCAACGTCGC GCTGCGCACC GTCACGCTGG GCGTGACCGA GGGCGACCGC
GTCTCGATCG CGCGGGGCCT GAACCCGGGC GAGCGCGTGG TCATCGACGG CGCCGACAAG
CTGCGCGACG GCTCGCCGGT GGAGGTGATC CAGCCGGGCG CGAGCCCGGC CAGCGCGCCG
GCGGCCGCGC ACGACGGCCA GGCGGCCCAG GCCCAGGGCG GCCATCGCCG CCACGGCGGC
GCATCGGCGC CGGCCGCCGC GCAGCCGTGA
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| Protein sequence | MSDAMDPKPG TPYAGHDTVS PTLLPPPRAG KPRRWILWVV LAVLVLIGYA IFHAVHRSTA
AGKGGPGGRG AAMTSGKPMP VMVATSGKGD INVVLTALGN VTPVNNVTVK TRVDGQLVRL
AFTEGQTVKA GDLLAEIDPR AYQAQLAQAE GQLARDTALL QNARLDLQRY QTLMAQDSIA
KQQVDTQASL VRQYEGTVKL DQGNADNARV QLSYTRITAP VSGRVGLRQV DPGNIVHTSD
TTGIVVITQI DPITVIYTLP EDTLPKVMPR LQAGDKLPVE AWDRGQTNLL AHGTLMTVDN
TIDNTTGTVK LRAQFPNQNA ALFPNQFVNV RMRVDTLHDQ VILPGAAIQR GTQGTFVYVV
GADGNVALRT VTLGVTEGDR VSIARGLNPG ERVVIDGADK LRDGSPVEVI QPGASPASAP
AAAHDGQAAQ AQGGHRRHGG ASAPAAAQP
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