Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03130 |
Symbol | RSp1186 |
ID | 1223498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1507996 |
End bp | 1508865 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637241051 |
Product | hypothetical protein |
Protein accession | NP_522747 |
Protein GI | 17549407 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGAAC CGATGGACAT TGTCACCCGC ATCTCCCAGC GCGCCACCGA CCTGCGGCCG GCCGAGCAGA AGGTCGCGCA GACCGTGCTG GGCGACATCG CCGGGGCAGC CGAGGGCAGC ATCCAGACCC TGGCCGAGCG CGCGGGCGTG AGCGAAGCCA GCGTCACCCG CTTCGCCAAG GCGATGGGCT GCCGCGACGT GCGCGAGCTC AAGCTCAAGC TGGCGCAGGC GGCGGCCGTG GGCCAGCGCT TCCTCGACGG CGGCGCCGAC CGCCCGCCCT CCAGCGCCGA CGGCATCCTG GCCGACATCA CGCACGTGCT GGAGGCCAAC CGCGCGCTGG TGCGGCCCGA GGCGTTCCGC GCGGCCGCCG CGGCGCTGGT GGGCGCGCGC ATGATCGCCG TATTCGGCAT GGGCGGCGGC TCGACCACCA TGGCCGATGA GATGCGCTAC CGGCTCGCCC GGCTGGGACG GCCGGTCAGC ACCTATCATG ATGCGATGCT GCAGCGGATG GTGGCCGCCA CGCTCGGCCC GGAAGACGTG GTGGTGGTGT TCTCCGTCAC CGGACAGGTG CCGGAGATCA TCGATGGCGT CAACATCGCA CGGGAATACG GGGCCAAGGT GGTGGCCGTC ACGGCCATCG GCTCGCCGGT GGCGGCGCTG GCCGACATCC TGCTCCCGAT CCAGGCGATG GAGACCGACT TCATCTTCAA GCCGTCGTCA TCGCGCTACG CCATGATGAT GATGATCGAT CTGCTGGCCA CCGACGTCGC ATTGCAGCAG GCCGACCGCA GCAAGGAGCT GTTGCGGCGC ATCAAGCATG TGCTCGATGC GCATCGCGGC GGCGGCAACC GTCAGCCGCT GGGAGACTGA
|
Protein sequence | MREPMDIVTR ISQRATDLRP AEQKVAQTVL GDIAGAAEGS IQTLAERAGV SEASVTRFAK AMGCRDVREL KLKLAQAAAV GQRFLDGGAD RPPSSADGIL ADITHVLEAN RALVRPEAFR AAAAALVGAR MIAVFGMGGG STTMADEMRY RLARLGRPVS TYHDAMLQRM VAATLGPEDV VVVFSVTGQV PEIIDGVNIA REYGAKVVAV TAIGSPVAAL ADILLPIQAM ETDFIFKPSS SRYAMMMMID LLATDVALQQ ADRSKELLRR IKHVLDAHRG GGNRQPLGD
|
| |