| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03125 |
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| Symbol | RSp1416 |
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| ID | 1223728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1779291 |
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| End bp | 1780904 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637241279 |
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| Product | hypothetical protein |
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| Protein accession | NP_522975 |
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| Protein GI | 17549635 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3904] Predicted periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.516059 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCG CCGCGACCCA CGTCTGCCCG CCCGCTTGTC CCGCCGATCC ACAGCCGGCG
GCGCACCCCT CACGCAATGT CTTCGTGCGG CACTGGCGCG GCGACTACAG CCTCGTCCGC
TCCTACTGGC TGCATACCGC CCTGATGCAA TTCGGCACGG TGACGCTCAG CGCGGGCATC
ACCCATGCGC TGGCGCACAA TGCGCCGGCG CGCGCCGCGT CATCGGCGCT GCTGCTGATC
TATGCGCTCG GGCTGGTCTT GTGGATGTGG GCCATCGTCG GCACCTGGCG TGCGGCGGAG
CGCGAACAGG CGGAGAAGCG GCGCGCCGGA CTGTCGGGCG TGTGGTGCAA GGTGGCCAAG
CTGATGATCC TGCTGGGCGC GATCGGCACC GGATCGCGCG TCGTCAATGA CCTGCCACGC
CTGGGCGCGC ATGTGCGCAC CGCGCTGGGC GAGCAGGCGG CTTCGCCGTT TGCCGTCACG
CCGCAGCGCG ACGGGCGCGC CGTGCTCTTC ACCGGCGGCA TCAACGACGG CGCCGCCGAC
GCCCTGGAGC AGGCCCTGCG CAAGACGCCC GGCGCCGCCA CCGTGGTGCT GCGCTCCGAG
GGCGGCTGGC TGCGCGAGGG GACGCTGGTC GCCGCGGTGA TCCGACGCCA TCGCCTGCAC
ACCTATGTGG AACGCACCTG CGCATCGGCG TGCACCATCG CCTTCCTGGC CGGCGACGAC
CGCGCGGCCG CGCCCGGGGC GCGCATCGGC TTTCATCGGC CGCGCGCGAT CGGCGCCGAC
CAGGACCAGG CACCCGGCGC CACCGACAGC GCGCTCTGGA GCGCCTATGC CGCGGCCGGC
CTGCCGGATG CCTTCGTGCG CCATGTCCAG GCAACGCCAT TCGACGCGAT ATGGTTTCCG
ACCGACCGGG AATTGCTGGA CAACGGCGTC GTCACGCGCG CCTCGTCCGG CGGCGAATAC
GCGACCATGG CCACGCTGCT CACCACGCGC GAAGCCCTCT CCGCCGAACT GCGCGCCGCG
CCGCTCTACG CAACGCTCGA ACGTAAATAC CCCGCCCACT TCAAGGGCCT GCTCGACAAC
ATCTGGCCCG CCCTGCAGCG CCATGCCAGC GATGCCGAGA TCATCGCCCA GCTGCGCGCG
CAATCGTCCA GGCTCTACCG CGCCCTGCTC CCGACCGCGC CCGATGCGCT GCTGCTCGCC
AATGCCCGCC TGACGATCGA TCAGGCGCAG ACCCTGCAGC GCATCAGTCC GGAGGCTTGC
GTGGGCTACC TGGACGGCAC CGCCGGCCCC GGCACGATCG CCGCCCGTCT GCCGGGCACT
CTGCTGACGC GCGAGCAGGC CCTGTTCTCC GACCTCGTGC AGGCAGCCGA TCCCGAGCAC
GCCCCCATGG TGACCCGCGC CCAGGCCATG CCGGCGCTGC AGCTGGCGAT CGCCGCGCTG
CCCGCGCAGG AGCAGCGCGT GCTGACCTTC CCGACACTGC GTCACACCGC GCCGGCCGCC
GAGCGCTGCC GCGCCTTGAT CGACTTTGCC CAGGCCATCC TGTCGCTGCC CGACGCCGAT
CGCGTGCTCG CCCTGCGCGG CATCTACGCC CCGACGTCCG CGCCGGATGC GTGA
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| Protein sequence | MTSAATHVCP PACPADPQPA AHPSRNVFVR HWRGDYSLVR SYWLHTALMQ FGTVTLSAGI
THALAHNAPA RAASSALLLI YALGLVLWMW AIVGTWRAAE REQAEKRRAG LSGVWCKVAK
LMILLGAIGT GSRVVNDLPR LGAHVRTALG EQAASPFAVT PQRDGRAVLF TGGINDGAAD
ALEQALRKTP GAATVVLRSE GGWLREGTLV AAVIRRHRLH TYVERTCASA CTIAFLAGDD
RAAAPGARIG FHRPRAIGAD QDQAPGATDS ALWSAYAAAG LPDAFVRHVQ ATPFDAIWFP
TDRELLDNGV VTRASSGGEY ATMATLLTTR EALSAELRAA PLYATLERKY PAHFKGLLDN
IWPALQRHAS DAEIIAQLRA QSSRLYRALL PTAPDALLLA NARLTIDQAQ TLQRISPEAC
VGYLDGTAGP GTIAARLPGT LLTREQALFS DLVQAADPEH APMVTRAQAM PALQLAIAAL
PAQEQRVLTF PTLRHTAPAA ERCRALIDFA QAILSLPDAD RVLALRGIYA PTSAPDA
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