| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03123 |
|---|
| Symbol | RSp1418 |
|---|
| ID | 1223730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 1782597 |
|---|
| End bp | 1783436 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637241281 |
|---|
| Product | hydrolase protein |
|---|
| Protein accession | NP_522977 |
|---|
| Protein GI | 17549637 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGG CCGTCAACCT GGCGCACGTG AATGGCGTGG ATATTGAGTA CGTGGAGCAG
GGAGAGGGGC CGCCTCTCGT GTTCGTGCAT GGCTACATCT CCGATCACCG TGTCTGGGAT
GATCAGATAC GCCTCTTTTC CAGGCACCAC AAGGTCATCG CACCGTCGCA GCGTTACTTC
GGAACGCGGC AGTGGCGGGA CCGTGGCGAG CGGTTTTCGC CGTCCACACA TGTGGATGAC
CTCGCCGCCC TGATACGCAA ACTTGGCGTG GCTCCAGCGC ATATCGTCGG ATGGTCGTAT
GGCGCGGCAC TCGCGCTTGC CCTTGCCGTG CGGCATCCGG ACTGCGTGGG CTCCCTGTTT
GCTTACGAGC CGGGCGTCAC CACATTTGTC GAGGATCCCG AGGAGGTCAG GATCGTGACC
GAAGACCGTC ACGACATGGT TGGCGCAGCC CTGGCCCTGA AAAGCCGGGG AGACTCCGCC
GGGGCGGTCG GCGCGGTATT CGATCACGCA AACGGAAGCA CGGGCCTTTT CGAGGCGTTA
TCCGATACGG CGCGTTCGAT CTTCCTCGAT AACGCGCGCA CCGTCCCCCT GATGTTCGGC
GCAGCAGAGC CTTTATCCAT CAACCGGGCC GATCTGGCGC ATATCAAAGT CCCCGTCGTG
ATGGCACGGG GCGGGTTGAC CCGGCCGTTG TATCGCATCG CAACGGACGT GGCGCATGGC
TGCATTCCGG CGTCGCGCTT GGCGGTCATT CCCGACGCGA TGCATGCGTC GCCAGTGCTG
ACGCCCACGC GCTTCAATCA GGCGTTACTC GACCATCTTT CTGCGTTGGC GGTCGCCTAA
|
|---|
| Protein sequence | MTAAVNLAHV NGVDIEYVEQ GEGPPLVFVH GYISDHRVWD DQIRLFSRHH KVIAPSQRYF
GTRQWRDRGE RFSPSTHVDD LAALIRKLGV APAHIVGWSY GAALALALAV RHPDCVGSLF
AYEPGVTTFV EDPEEVRIVT EDRHDMVGAA LALKSRGDSA GAVGAVFDHA NGSTGLFEAL
SDTARSIFLD NARTVPLMFG AAEPLSINRA DLAHIKVPVV MARGGLTRPL YRIATDVAHG
CIPASRLAVI PDAMHASPVL TPTRFNQALL DHLSALAVA
|
|---|
| |