Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03100 |
Symbol | RSp1443 |
ID | 1223755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1812536 |
End bp | 1813012 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637241306 |
Product | putative signal peptide protein |
Protein accession | NP_523002 |
Protein GI | 17549662 |
COG category | [S] Function unknown |
COG ID | [COG4875] Uncharacterized protein conserved in bacteria with a cystatin-like fold |
TIGRFAM ID | [TIGR02246] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.750749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.99312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACG CTGGTGTCGT ATCCCTGATG GCTGCCGCCG CAACGGTTCT CCTGGTGTCG AGCCCGGCCA GCGCGCAAAC GGCCCCGGCC GCATCGTGCA CACCGACCAC CGATCAGCAG ATTGCTGCCC TGTTCGATCG CTGGAACGAT ACGCTGCGTA CGGGCGACCC GGACAAGGTC ACCGCCAACT ACGCGACGGA CGGCGTGCTG CTGCCGACCG TCTCGAATAC GCCGCGCACG AGCCCCGGCG CCATCCGGGA CTATTTCGTC AAGTTCCTGA AGGGCAAGCC GCAAGGCACG ATCGATAGCC GCGTCATCAA GATCGGCTGC AACATCGCGC AGGACATCGG TACCTACACG TTCAAGTTCG CCGATGGCAA GGCCGTGCAC GCGCGCTATA CGTATGTGTA CGAGTGGCAG AACGGCCAGT GGCTGATCGC CCACCATCAC TCGTCGGCCA TGCCGGAGCG CGATTGA
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Protein sequence | MKHAGVVSLM AAAATVLLVS SPASAQTAPA ASCTPTTDQQ IAALFDRWND TLRTGDPDKV TANYATDGVL LPTVSNTPRT SPGAIRDYFV KFLKGKPQGT IDSRVIKIGC NIAQDIGTYT FKFADGKAVH ARYTYVYEWQ NGQWLIAHHH SSAMPERD
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