Gene RS03100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS03100 
SymbolRSp1443 
ID1223755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1812536 
End bp1813012 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content64% 
IMG OID637241306 
Productputative signal peptide protein 
Protein accessionNP_523002 
Protein GI17549662 
COG category[S] Function unknown 
COG ID[COG4875] Uncharacterized protein conserved in bacteria with a cystatin-like fold 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.750749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.99312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACG CTGGTGTCGT ATCCCTGATG GCTGCCGCCG CAACGGTTCT CCTGGTGTCG 
AGCCCGGCCA GCGCGCAAAC GGCCCCGGCC GCATCGTGCA CACCGACCAC CGATCAGCAG
ATTGCTGCCC TGTTCGATCG CTGGAACGAT ACGCTGCGTA CGGGCGACCC GGACAAGGTC
ACCGCCAACT ACGCGACGGA CGGCGTGCTG CTGCCGACCG TCTCGAATAC GCCGCGCACG
AGCCCCGGCG CCATCCGGGA CTATTTCGTC AAGTTCCTGA AGGGCAAGCC GCAAGGCACG
ATCGATAGCC GCGTCATCAA GATCGGCTGC AACATCGCGC AGGACATCGG TACCTACACG
TTCAAGTTCG CCGATGGCAA GGCCGTGCAC GCGCGCTATA CGTATGTGTA CGAGTGGCAG
AACGGCCAGT GGCTGATCGC CCACCATCAC TCGTCGGCCA TGCCGGAGCG CGATTGA
 
Protein sequence
MKHAGVVSLM AAAATVLLVS SPASAQTAPA ASCTPTTDQQ IAALFDRWND TLRTGDPDKV 
TANYATDGVL LPTVSNTPRT SPGAIRDYFV KFLKGKPQGT IDSRVIKIGC NIAQDIGTYT
FKFADGKAVH ARYTYVYEWQ NGQWLIAHHH SSAMPERD