| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03096 |
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| Symbol | RSp1447 |
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| ID | 1223759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1821120 |
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| End bp | 1822280 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637241310 |
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| Product | putative Leu/Ile/Val-binding lipoprotein transmembrane |
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| Protein accession | NP_523006 |
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| Protein GI | 17549666 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0735365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.368181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAAG ACCGGTTGTT GAAGCGCTGG CTGGCGAAAC TGGCTGCTGT TGTACTGTTC
TGGACGGGGT GCCACGCGCA TGCGCAGAAC GGTGTCACGG CCGACAGCAT CATCATCGGC
CAGTCGGCCC CATTGAGCGG GGCGGCGGCA CAGCTGGGCC AGCAGCTGAG CCTGGGTGCC
CGGCTGTATT TCAACGCTGT CAATGCGGCG GGCGGAATCC ACGGCCGCAA GATCGATTTC
AAGGTATTGG ACGATGGGTT CGATGCCGAC ACGAGCGCCC GCAATACCAG GATGCTCATC
AACGACGCCA AGGCGTTCGC GCTGTTCGGC TATGTCGGCA CGCAGAGCAG CATGGCGGCG
CTCAAGGTTG CCAATCCGGC GGGCGTGCCG TTCTTTGCGC CATACGCCGG CGCGCAGTCC
TTGCGCGAGC CCTTCGCCCG CAACGTCTTC CACGTGCGTG CCGGGTTCAA CGACGAAACC
GCGGCGATCA TTCAACAGAT CAGGGCCGTG GGCCAGAAAC GCATCGCCGT GATCTACAAC
GACGACGCGT ATGGCAGGGC CGGACTGGAC GGCCTCCGGC ATGCGCTGGC CCTTCCGGCC
AATGCAGGTC TGGCGCTGGT CGGCCAGGCG AGCGTGGCGC GCTACACCAC CGATATCAAG
GCAGTGCTCA GTAGCGTGTT GGCGCAGAAG CCGGAGGTCA TCGCCGTTGT CTGCGGCTAT
CAGACGGTGG TGGCGCTGGT GAGCGAGGCA CAGGTTCAAG GCTATGCCGG CCAGTTCTAC
AACCTGTCGC TGGTCGGCTC CAAGATGCAG ACAAAGGAAC TGGGCACGAC CGGAAGCGGT
GTTGTGATCT CCCAGGTCAT GCCTTATCCG CGCAGCGTAT CGACGCCGAT CGTGCGCGAA
TACCAGAAGC TGCTCAAGGC CAATGGCATC ACCGACTTCG ACTATTGCAG CCTGGAGGGC
TATATCGCTG CACGCGCGCT CGTTGATGGG CTCAGAGGGG CGGGCCGCGA TCTCACGCGC
GACAAGTTCA TCCGGGCCCT CGAAGCCCTG GGCAACCACG ACATGGGCGG TTTCGTGCTC
AACTTCTCGC CAAGCAATCA CCTCGGCTCG AGCTTTGTCG AAATGACGAT CGTGAGCGCG
CGGGGGCAGG TGATCCGCTG A
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| Protein sequence | MAQDRLLKRW LAKLAAVVLF WTGCHAHAQN GVTADSIIIG QSAPLSGAAA QLGQQLSLGA
RLYFNAVNAA GGIHGRKIDF KVLDDGFDAD TSARNTRMLI NDAKAFALFG YVGTQSSMAA
LKVANPAGVP FFAPYAGAQS LREPFARNVF HVRAGFNDET AAIIQQIRAV GQKRIAVIYN
DDAYGRAGLD GLRHALALPA NAGLALVGQA SVARYTTDIK AVLSSVLAQK PEVIAVVCGY
QTVVALVSEA QVQGYAGQFY NLSLVGSKMQ TKELGTTGSG VVISQVMPYP RSVSTPIVRE
YQKLLKANGI TDFDYCSLEG YIAARALVDG LRGAGRDLTR DKFIRALEAL GNHDMGGFVL
NFSPSNHLGS SFVEMTIVSA RGQVIR
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