| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03087 |
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| Symbol | RSp1457 |
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| ID | 1223769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1831740 |
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| End bp | 1832867 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637241320 |
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| Product | putative cation-efflux system signal peptide protein |
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| Protein accession | NP_523016 |
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| Protein GI | 17549676 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.297372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACTGA ATCGCCGCAT GGCCGCATTG GCGGCCTTCC TCGCCGTGGC AGGCATTGCC
CTGTGGCGGC TGGCCCCCAC CGCGCCCGCG CGCGCCGAAA CGCAGGCGCC CCCCGCCGCG
CTCGCCGTCA GCCTGACCGA GCCCACGCGC CTGGACTGGC CCGACACCAT CGAGGCCAAC
GGCACCACCG CCGCCTGGCA GGAAGCCGTC ATCGGGGCGG AGACCGGCAG CCTGCGCATC
ACCGAACTGC TGGCCGACGT GGACAGCACC GTCAAGCGCG GGCAAGTGCT CGCACGGCTG
GCCGATGCCA CCGCAACGGC AGACCTGCGC AAGCAGGAAG CCGCGGTGGC CCAGGCGCGC
GCCAACCTCG AACAGGCCCA GGCCGACCTC AAGCGCTCGA AGCTGGCCGC CGACAGCGGT
GCCCTGTCGG CGCAGAAGCT CGACGAATAC CGCATCACCG AGGCGGTCGA CCGCGCCGCG
CTCGCCTCCG CCGAGGCTGA GCTGCAAAGC AAGCGCATCA CCGTCTCGCA GACGCGCATC
GTGGCGGTGG ACGACGGTGT CATCTCGTCG CGCTCGGCGC TGCTCGGCAA CGTCGTGAGC
GCCGGCACGG AACTGTTCCG GCTGATCCGG CAGGGACGCG TCGAATGGCA GGCGGAAGTC
GACGCGCAGC AACTGACGCG CATTCAGGCC GGCCAGCCGG CGCACGTGAC CCTGCCCACC
GGCAAGACCG CCGACGGCAA GGTCCGCCTG GTCTCGCCCA CCCTGTCGAC CAGCACCGGC
CGGGCCATCG TCTACGTGGC GCTGGACGGA CACGACGCCC AGCCCGGCAT GTTTGCCAGC
GGACGCATCG AACTGGCCGG CCGGCCGGCA CTGACCGTGC CGGAATCGGC CCTGGTGCCG
CGCGACGGCC GCACGGACGT GTACGTGCTC AACAGCGACG GCGCGACCGT CGCACGGCAC
ACCGTGGCTA CCGGGCGCCG CCGCGACGGC CGCGTCGAAG TCACCGCCGG GCTCGACGCC
GGCGCGCGCG TGGTGGCCAG CGGCGGCGGC TTCCTGTCGG ACGGCGCGCG CGTGAGGGTC
ACGCCGTCGG CCGTGGCCAG CAACACCAAG GAAGGGGCCG CGCGATGA
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| Protein sequence | MKLNRRMAAL AAFLAVAGIA LWRLAPTAPA RAETQAPPAA LAVSLTEPTR LDWPDTIEAN
GTTAAWQEAV IGAETGSLRI TELLADVDST VKRGQVLARL ADATATADLR KQEAAVAQAR
ANLEQAQADL KRSKLAADSG ALSAQKLDEY RITEAVDRAA LASAEAELQS KRITVSQTRI
VAVDDGVISS RSALLGNVVS AGTELFRLIR QGRVEWQAEV DAQQLTRIQA GQPAHVTLPT
GKTADGKVRL VSPTLSTSTG RAIVYVALDG HDAQPGMFAS GRIELAGRPA LTVPESALVP
RDGRTDVYVL NSDGATVARH TVATGRRRDG RVEVTAGLDA GARVVASGGG FLSDGARVRV
TPSAVASNTK EGAAR
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