| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03086 |
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| Symbol | RSp1458 |
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| ID | 1223770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1832864 |
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| End bp | 1835968 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637241321 |
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| Product | transporter transmembrane protein |
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| Protein accession | NP_523017 |
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| Protein GI | 17549677 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.43508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.286784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTT CCTCCTGGTC GATCCGCAAC CCGGTGCCGG CGGTGCTGTG CTTCATTCTG
CTGACCGTCT TCGGCCTGAT CGGCTTTCAC AAGCTGCAGG TCCAGGATTT TCCGGACATG
GATCTGCCGA CCATCAGCAT CTCGGCCTCG CTGGAAGGCG CCGCGCCCTC GCAGCTGGAG
AACGAGGTCG CCCGCAAGAT CGAAGACAAG CTGACCTCGC TGTCGCAGCT GGACCACATC
ACCACCAAGA TCACGGATGG CGCGGTCAGC ATCAGCGTCA GCTTCAAGCT GGAGAAGGAC
CCGCAGACCG CGCTGAGCGA GGTGCGCAAC GCCGTGGACG GCGCGCGCGC CAGCCTGCCC
AGCGAGATGG CGGCGCCCAC CGTCTCGAAG AGCGACGCGG CCAATTCCGC GCTGCTGACG
TACACGGCCA GCTCGACCAC GCTCGACGAG CAAGACCTGT CATGGTTCGT CGACAACGAT
CTGGCCAAGG CACTGCTGTC GGTCAAGGGC GTCTCCAAGG TCGAGCGGAT CGGCGGCATC
GACCGCGAAG TCCACGTCGA CCTGAACCCG GCCCTCATGG CCGGCCTCGG GCTGACGGCC
GAGACCGTCT CGAGCGAGCT CACGGCCATG CAGCGCGAGC GCTCCGGCGG CCAGGGCGAC
ATCGGCGGAC AACGGCAATC CTCGCGCACG CTCGTCGGCG TGGGCTCGGC TGCGGATGTG
GCGGCCCTGA CCATCACCAC CGGCGACGGC CGGCGCGTGC GGCTGGACCA GATCGCCCGC
GTCACCGACG GCGCGGCGGA CCGCGCGTCG TATGCCTTCC TGGACGGCAA GCCGGTCGTT
GGCGTGCAGA TCACGCGCGC CAAGGGCAAC TCGGACGTGA CGGTGCTGCA CGACGTGCGC
AAGGCCATCG CCACCTTTGC CGAGTCGCAT CCCGAGGTGC GCCTGGCCGA GGCCAGCAAC
ACCGTCAGCC CCATCGAGGA CAACTACGAA GGCTCGATGA GCATGCTGAT CGAGGGCGCG
CTGCTGGCGA TCGCGGTGGT CTGGTGGTTC CTGCGCGACG GCCGCGCCAC GCTGGTGTCG
GCGGCGGCCT TGCCGCTCTC GATCATCCCG ACCTTCGGCG CGATCTACCT GGCCGGCTAT
TCGCTCAACA CCATCACGCT GCTGGCCCTG TCGCTGGTGG TCGGCATTCT GGTCGATGAC
GCGATCGTCG AGATCGAGAA CATCGAGCGG CACCTGCGCA TGGGCAAGAC ACCCTACCAG
GCCGCCATGG AAGCCGCCGA CGAGATCGGG CTGGCCGTGA TCGCCACGAC CTTCGCGCTG
GTGGCCGTGT TTCTGCCGAC GGCGTTCATG TCGGGCATTC CGGGGCTGAT CTTCCGGCAG
TTCGGGGTGA CGGCGTCGGT GGCGGTGCTG ATGTCGCTGC TGGTGGCCCG GCTGCTGACG
CCGATGATGG CGGCCTATCT GATGAAGGCG ACCCGGCATG CCGAACGCGA CGGCCCGGTG
ATGACGCGGT ATCTGCGCTG GGTCGGCGGC GGGCTCGACA AGCGCGGCCG CACCATGTTG
GCCGCCGGGC TCATGCTGCT GCTCTCGCTC GCGATGGCGG CCGCCCTGAA GACCGGCTTC
TTCCCCGCGC AGGACAAGGC CCAGACCCAG GTCACGCTGG AGCTCACGCC GGGCAGCACG
CTCGAGCAGA GCCGCGCCGT GGCGCTGCAG GCCGAGGCGC TGATCCGCCG GCTGCCGGAG
GTCAAGGGCG TCTTCAGCAC GGTCGGCAGC GCCAGCGACA GCAGCAACCC CGCCGCCGGC
ACCAGCAGCA CGGCCGATGT CCGCACCTCG ACGCTCGTGG TCGATCTCGT TGCGCGCGGC
GAGCGCAAGT CAAAGCAGTC GGCGGTGGAA GAGGCGATCC GCCACCAGCT GCGCGACCTG
CCCGGCGTAC GTGTCGCGGT CAACAACGGC GGCAACGGCG AGAAGCTGCA GATCACGCTG
GCCGGCAGCG ATGCCACCTC GCTCGAAAGC GCGGCGGCGG CGCTGGAGTC GCAGCTGCGG
ACCCTGCACG GCATCGGCAA CGTCACCTCC AGCGCCGCGC TGCAGCGCCC CGAAGTCCAG
TTCCGGCCGG ACCCTGCGCG CGCGGCGGCC CTGGGCGTGA CGACCGAGGC GGCGGCCGAC
GCCATCCGCA TCGGCACCTA TGGCGCCTAT TCGACCTCGC TGCCCAAGCT GAACCTTCCC
GAGCGGCAGA TCGCGATCCG GGCGCGCATC GACCCGGCCT TGCGGCAAGA CCTGGATGCC
ATCGGCCAAT TGCGCGTGGC CGGCACGAAC GGCAGCGTGA CGGTGGCCTC GGTCGGCACG
CTGTCCATCG GCAGCGGCCC GTCGCAGATC GACCGGCTCG ACCGCGCGCG CAACATCACG
CTGTCGGTCG AGCTGAACGG CCGCACCATC GGCGAGGTCA ACCAGGAAGC GCAGCAACTG
CCGGCGCTGC AGCACTTGCC GGCCGGCGTC CACCAGGTCC AGCAGGGCGA GCTGCAGAAC
ATGAGCGAGC TGTTCCAGAG CTTCGGCCTG GCCATGGCCA TCGGCGTCTT CTGCGTGTAT
GCGGTGCTGG TGCTCCTGTT CCACGACTTC CTGCAGCCGG CCACCATCCT GTGCGCGCTG
CCGCTGTCGC TGGGCGGTGC GCTGCTCTCG CTGCTGATCA CGCGGATGAG CTTTTCCATG
CCCGCGCTGA TCGGCCTGCT GATGCTGATG GGCATCGTGA CCAAGAACTC GATCCTGCTG
GTCGAGTACG CCATCATGGC CCGGCGCGAG CACGGCCTGA GCCGGCTGGC GGCGCTGATG
GACGCCTGCC ACAAGCGGGC CCGCCCGATC GTGATGACGA CCATCGCCAT GGGGGCCGGC
ATGCTGCCCA ACGCGCTCGG CCTGGGGGCG GAACCCAGCT TCCGCCAGCC CATGGCCATC
GTCGTGATCG GCGGGCTGCT GGCTTCGACG CTGCTGAGCC TGCTCGTGAT TCCCGTGGTG
TTCACCTACG TGGACGACCT GGAGCAGTGG CTGCGCCGCC GATTCCGGCA GGCCAAGACC
CATCAGGACG CATCGTTCCC GCTGCCCGCG CCCCATGATC AGTGA
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| Protein sequence | MNISSWSIRN PVPAVLCFIL LTVFGLIGFH KLQVQDFPDM DLPTISISAS LEGAAPSQLE
NEVARKIEDK LTSLSQLDHI TTKITDGAVS ISVSFKLEKD PQTALSEVRN AVDGARASLP
SEMAAPTVSK SDAANSALLT YTASSTTLDE QDLSWFVDND LAKALLSVKG VSKVERIGGI
DREVHVDLNP ALMAGLGLTA ETVSSELTAM QRERSGGQGD IGGQRQSSRT LVGVGSAADV
AALTITTGDG RRVRLDQIAR VTDGAADRAS YAFLDGKPVV GVQITRAKGN SDVTVLHDVR
KAIATFAESH PEVRLAEASN TVSPIEDNYE GSMSMLIEGA LLAIAVVWWF LRDGRATLVS
AAALPLSIIP TFGAIYLAGY SLNTITLLAL SLVVGILVDD AIVEIENIER HLRMGKTPYQ
AAMEAADEIG LAVIATTFAL VAVFLPTAFM SGIPGLIFRQ FGVTASVAVL MSLLVARLLT
PMMAAYLMKA TRHAERDGPV MTRYLRWVGG GLDKRGRTML AAGLMLLLSL AMAAALKTGF
FPAQDKAQTQ VTLELTPGST LEQSRAVALQ AEALIRRLPE VKGVFSTVGS ASDSSNPAAG
TSSTADVRTS TLVVDLVARG ERKSKQSAVE EAIRHQLRDL PGVRVAVNNG GNGEKLQITL
AGSDATSLES AAAALESQLR TLHGIGNVTS SAALQRPEVQ FRPDPARAAA LGVTTEAAAD
AIRIGTYGAY STSLPKLNLP ERQIAIRARI DPALRQDLDA IGQLRVAGTN GSVTVASVGT
LSIGSGPSQI DRLDRARNIT LSVELNGRTI GEVNQEAQQL PALQHLPAGV HQVQQGELQN
MSELFQSFGL AMAIGVFCVY AVLVLLFHDF LQPATILCAL PLSLGGALLS LLITRMSFSM
PALIGLLMLM GIVTKNSILL VEYAIMARRE HGLSRLAALM DACHKRARPI VMTTIAMGAG
MLPNALGLGA EPSFRQPMAI VVIGGLLAST LLSLLVIPVV FTYVDDLEQW LRRRFRQAKT
HQDASFPLPA PHDQ
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