| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03085 |
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| Symbol | RSp1459 |
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| ID | 1223771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1836105 |
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| End bp | 1837829 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637241322 |
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| Product | signal peptide protein |
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| Protein accession | NP_523018 |
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| Protein GI | 17549678 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.432233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.347904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCGA ACACGGGGCG TATCTGGGGT GCGTTGCTGT TGGGATGGTT CGCGGCGGGC
TTCAGCCCCG GCGCCTCGGC CGCGCCGGCC GAGCTCGTGG TCAGGAATGG CCGCTTCTAT
ACGCTGGACG CCGGCAAGCC GTGGGCGCAG GCGGTGGCGG TGCGCGATGG CCGGTTCGTT
GCGATCGGCA GCGATGCCGA GGTCGCGCAA CTGGTCGGGC CGGCGACGCA GGTGGTCGAT
CTGCACGGCG CGATGGTGGT CCCCGGCTTG AGCGATGTGC ATGCGCATCC GCTCGAGGGC
GCGTACGAGG CGCTGTACCA CTGCGCGCTT GCGCCGACGG GCGATCTCGA TGCGGTGCTG
GCCGCGGTCG GCGCTTGCGC CGCGCGGGCG CAGCCCGACG ACTGGATCGT CGGCGGGCCG
TGGTCCAGCG CGCTGCTCGG TGCGCTGGAG ACGCCGGAAA GCCTTGCCGC GCTCGATCGT
GCGAGCAAGG GGCTGCCGGT GCTGCTGCGC GACGATACCT TCCATAACCG CTGGGCGAAC
AGCGTGGTCC TGCAGCGCGC GGGCATCGGC CCCGGCGCCG CCGCGCCCGC CGGCGGCGCG
TACGTCATGG CCGACGGCAA GCCCACCGGC CTGATCAAGG AGCCGCCCGC GTGGCAGCCC
GTCGAGAAGC TGATCCCGCC GCGCACGCCG GCGCGCCTCA AGCACGCGGC CGAAGCGGCG
GCGCACAGGC TCAACAGCTT CGGCATCACC GGCGTGCAGG ATGCCTTCGT CACGCGCCAG
ATCCTCACTG GCTGGCACGC CGCCGACACG GACGGCCAGG GCCTGCCGCT GCGCGTGGTG
GCGTCGATGG GCGTGGAGCC CGAAGCCGGC GGAGACGGCC TGCCCGACCG GCAGACGCTC
GCGCAGGTGC GCAGCGACCG CCTGCGTCCG GACTTCGTCA AGGTCTTCCT CGACGGCGTG
CCGATGAGCT ACACCGCGGC CATGCTGGAG CCGTACGCGC CCAGCGATGC CCATGGGCAC
GACTTTCGCG GCGCGCCGCT CTATGCGCTG GCGGTGCTGA CCGAAAAGCT GACGGCGCTC
GACCGGCAGG GCACGCCTGT CAAGCTGCAT GCCGTGGGCG ACGGCGCGGT GCGGCTTGCG
CTGGATGCGA TCGAGGCGGT GCGCAAGGCC AACGGCATGA ACGGCCCCCG CCACCAGATC
GCGCACATCA CCTTCATCGC GCCGTCCGAC ATGCCGCGCT TCGCCAGGCT CAATGTCGTG
GCGGATGTGT CGCCGATGCT GTGGTTCCCG CACGCCTATA CCCCGCTGTT CGAGAAGGTG
GTCGGACACG CGCGCACGCT GCACAGCTAC CCGATCGGCA GCCTGATCCG GGCCGGCACG
CTGGTCGCGG GCGGCTCGGA CTGGCCCGCC GGGCAGCAGA CGCCCGACCC GTGGCTCGGC
ATCGAAGGGC TGGTCACGCG GCGCAATCCG GCCGGCAACG TGCCCGGTGT GCTGGACGCG
CACGAGGCGA TCCGGCTCGG CCAGGCGCTG CGGCTCTACA CCCTCAACAG CGCGACAGCG
ATGGGGCTGG GCCAGGAGAC CGGCAGCATC GAGGTCGGGA AGTCGGCCGA CTTCGCGGTG
CTGAGCCAGG ACCTGTTCAA GATCCCGCCG TCGCGGATCC ACCGGACCAC GGTGCGCGTC
ACCTACTTCC AGGGGCGGCC GGTCTATCGC GCCGCCGATC AGTAA
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| Protein sequence | MSANTGRIWG ALLLGWFAAG FSPGASAAPA ELVVRNGRFY TLDAGKPWAQ AVAVRDGRFV
AIGSDAEVAQ LVGPATQVVD LHGAMVVPGL SDVHAHPLEG AYEALYHCAL APTGDLDAVL
AAVGACAARA QPDDWIVGGP WSSALLGALE TPESLAALDR ASKGLPVLLR DDTFHNRWAN
SVVLQRAGIG PGAAAPAGGA YVMADGKPTG LIKEPPAWQP VEKLIPPRTP ARLKHAAEAA
AHRLNSFGIT GVQDAFVTRQ ILTGWHAADT DGQGLPLRVV ASMGVEPEAG GDGLPDRQTL
AQVRSDRLRP DFVKVFLDGV PMSYTAAMLE PYAPSDAHGH DFRGAPLYAL AVLTEKLTAL
DRQGTPVKLH AVGDGAVRLA LDAIEAVRKA NGMNGPRHQI AHITFIAPSD MPRFARLNVV
ADVSPMLWFP HAYTPLFEKV VGHARTLHSY PIGSLIRAGT LVAGGSDWPA GQQTPDPWLG
IEGLVTRRNP AGNVPGVLDA HEAIRLGQAL RLYTLNSATA MGLGQETGSI EVGKSADFAV
LSQDLFKIPP SRIHRTTVRV TYFQGRPVYR AADQ
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