Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03075 |
Symbol | RSp1469 |
ID | 1223781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1847767 |
End bp | 1848411 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637241332 |
Product | putative tyrosine specific protein phosphatase |
Protein accession | NP_523028 |
Protein GI | 17549688 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACA AAAAGCAAGC GTTCCCCTCT TTTGCCAACA TGCCTTCCTG CATCCGGACA ACGGTCTTCC TGTCGATCGC TACCGTTATG ACGCTCCTTG CCGGTTGTTC AACTCCGATG CACGAGCCGG GCAAGCCAGT CAATTTTGGC GTTGTCTCCG AAGGGGTTAT CTCGATTTAT CGCGGAGGTG AGCCAGTTGA TGAGCAAGAG TGGCAATTTC TAAAAGACTC AAAAATCAAA ACCATTGTAA AGCTCAATCA ATATTCGAAA GCGGTCAGCG AGTCCGAGGA AGATCATCTT GCCGAGAAAT ATGGCATCAA GGTGATCAAA GTATTCATGG GGCCGGAGGA TTGCATCCTG GGGAAACACT GCAATATCGA TCTCGATGAG ATGCCAGACC CCAATTTGGT TGAAAAAGCC ATCAACGAGA TTACGGCCGC CGCGGGAAAC GGCCCGGTGT ACGTCCACTG TAGCCACGGA CAAGATAGGA CTGGCTTGGT GGTGGCGCTC TACCGAATGC GGGTTCAAGG GTATTGCAGG AAAAAGGCCG ACGACGAACG CAAGCATTAC CGCCCAAATA TGATGTTGAC GGGCATAAAA AAGGAACTCG ATCAAGAAAA AGAATCGTCT ACCTGTGAGC ATTGA
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Protein sequence | MNDKKQAFPS FANMPSCIRT TVFLSIATVM TLLAGCSTPM HEPGKPVNFG VVSEGVISIY RGGEPVDEQE WQFLKDSKIK TIVKLNQYSK AVSESEEDHL AEKYGIKVIK VFMGPEDCIL GKHCNIDLDE MPDPNLVEKA INEITAAAGN GPVYVHCSHG QDRTGLVVAL YRMRVQGYCR KKADDERKHY RPNMMLTGIK KELDQEKESS TCEH
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