Gene RS03072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS03072 
SymbolRSp1472 
ID1223784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1851900 
End bp1852226 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content69% 
IMG OID637241335 
Product4-carboxymuconolactone decarboxylase protein 
Protein accessionNP_523031 
Protein GI17549691 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCC CATCGACCGT CGCGCGCGAC GCGTTCGGCC ACATCGCGCC CGCGCTGGCC 
GACTACACCG ACAACGTCCT CTTTGGCGAT GTCTGGCAGC GGCCGGGACT GTCCCCCCGC
GACCGCAGCC TCATCACCGT GGCCAGCCTG ATCGCGCTGT ATCGCACCAA CGAACTGCCC
TTCCATCTCA AGAAGGCGCT GGACAACGGC CTGCGCCGCG ATGAGCTGAT CGAGGCCATC
ACCCACCTCG CCTTCTACTC GGGCTGGCCG ACGGCCAGCA CGGCGCTGCC GATCGCGCAG
CGCGTCTTCG AGGCCGCAGG CGTCTGA
 
Protein sequence
MSAPSTVARD AFGHIAPALA DYTDNVLFGD VWQRPGLSPR DRSLITVASL IALYRTNELP 
FHLKKALDNG LRRDELIEAI THLAFYSGWP TASTALPIAQ RVFEAAGV