Gene RS03044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS03044 
SymbolRSp1497 
ID1223809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1877876 
End bp1878853 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content70% 
IMG OID637241360 
Productlipoprotein signal peptide 
Protein accessionNP_523056 
Protein GI17549716 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0900773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.662509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCGCT TCCCGCCACG GCGCCGGCCG GTGGCATGCG TGCTGGTGCT GCTCGCGCAG 
ATGCCCCCGG GGGCGTCGGC ACAATCGTGC TCCGTGGCCT CGGCCAGCCT CAACTTCGGC
TCCATCAGCC CGGTGCAGGC CGGCAACACC GACACCAGCA CCACGCTCAC CGTCAGTTGC
AGCGGCTTTC TGCTGCAGGG CACGGTGGCA CGGGCCTGCC TGAACCTGGG CGTCGGCAGC
GGCGACACCG GCATCTCGCC GCGCGTGCTC AGCGCCGGCG CCAACCAGCT TCAGTACAAC
CTGTATGCCG ATAGCGCGCG CAGCGTCGTC TGGGGCGGGC GCACCACACC GGCCACGCCG
GCCATCCAGG TCGACGTCTC GCTCGGCCTG CTGGGCTTCG GCTCGGCCAC CGTCACGGTC
TACGGACGCG TGCCGGGCGG GCAGACCACG GTGCCGGCGG GCGCCTACAC CCAGAGTTTT
TCGGGCACGG CCGCAACGGT GTATGCGCTG GCCAATCCCG GCTCGACCAC CTGCTCGTCC
ATTACCTCCA ACCCGACCAC GTTTTCGCTG AGCACCAGCG CAACCCTCGT CAGCGACTGC
CTGATCGGCG CGACCAACCT GGACTTCGGT ACGGCCGGAC TGCTCACTTC GGCGCTCACC
GCAAGCAGCG CCATCACGCT CAACTGCACG AACCAGACGC CCTGGACGCT GGCCCTATCG
GCGGGGTCCG GATCGGGTGC GACGGTTTCC GGCCGGCTGC TCACGCGCGG CGGCGACACG
CAGACGGTCG GCTACAACCT TTACACCAGC AGCGCCTATA CGACGGCCTG GGGCGATGGC
ACCGGCGGCT CGTCCAACGT CGCGGGCACG GGCACGGGGC TGGCGCAGAG CACCACGGTG
TTCGGGCGCG TGCCCGCGCA GACCACGCCC CAGGCCGGCA CGTACACCGA CACCATCATC
GTGACGGTGA CCTACTAG
 
Protein sequence
MTRFPPRRRP VACVLVLLAQ MPPGASAQSC SVASASLNFG SISPVQAGNT DTSTTLTVSC 
SGFLLQGTVA RACLNLGVGS GDTGISPRVL SAGANQLQYN LYADSARSVV WGGRTTPATP
AIQVDVSLGL LGFGSATVTV YGRVPGGQTT VPAGAYTQSF SGTAATVYAL ANPGSTTCSS
ITSNPTTFSL STSATLVSDC LIGATNLDFG TAGLLTSALT ASSAITLNCT NQTPWTLALS
AGSGSGATVS GRLLTRGGDT QTVGYNLYTS SAYTTAWGDG TGGSSNVAGT GTGLAQSTTV
FGRVPAQTTP QAGTYTDTII VTVTY