Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03044 |
Symbol | RSp1497 |
ID | 1223809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1877876 |
End bp | 1878853 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637241360 |
Product | lipoprotein signal peptide |
Protein accession | NP_523056 |
Protein GI | 17549716 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0900773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.662509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCCGCT TCCCGCCACG GCGCCGGCCG GTGGCATGCG TGCTGGTGCT GCTCGCGCAG ATGCCCCCGG GGGCGTCGGC ACAATCGTGC TCCGTGGCCT CGGCCAGCCT CAACTTCGGC TCCATCAGCC CGGTGCAGGC CGGCAACACC GACACCAGCA CCACGCTCAC CGTCAGTTGC AGCGGCTTTC TGCTGCAGGG CACGGTGGCA CGGGCCTGCC TGAACCTGGG CGTCGGCAGC GGCGACACCG GCATCTCGCC GCGCGTGCTC AGCGCCGGCG CCAACCAGCT TCAGTACAAC CTGTATGCCG ATAGCGCGCG CAGCGTCGTC TGGGGCGGGC GCACCACACC GGCCACGCCG GCCATCCAGG TCGACGTCTC GCTCGGCCTG CTGGGCTTCG GCTCGGCCAC CGTCACGGTC TACGGACGCG TGCCGGGCGG GCAGACCACG GTGCCGGCGG GCGCCTACAC CCAGAGTTTT TCGGGCACGG CCGCAACGGT GTATGCGCTG GCCAATCCCG GCTCGACCAC CTGCTCGTCC ATTACCTCCA ACCCGACCAC GTTTTCGCTG AGCACCAGCG CAACCCTCGT CAGCGACTGC CTGATCGGCG CGACCAACCT GGACTTCGGT ACGGCCGGAC TGCTCACTTC GGCGCTCACC GCAAGCAGCG CCATCACGCT CAACTGCACG AACCAGACGC CCTGGACGCT GGCCCTATCG GCGGGGTCCG GATCGGGTGC GACGGTTTCC GGCCGGCTGC TCACGCGCGG CGGCGACACG CAGACGGTCG GCTACAACCT TTACACCAGC AGCGCCTATA CGACGGCCTG GGGCGATGGC ACCGGCGGCT CGTCCAACGT CGCGGGCACG GGCACGGGGC TGGCGCAGAG CACCACGGTG TTCGGGCGCG TGCCCGCGCA GACCACGCCC CAGGCCGGCA CGTACACCGA CACCATCATC GTGACGGTGA CCTACTAG
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Protein sequence | MTRFPPRRRP VACVLVLLAQ MPPGASAQSC SVASASLNFG SISPVQAGNT DTSTTLTVSC SGFLLQGTVA RACLNLGVGS GDTGISPRVL SAGANQLQYN LYADSARSVV WGGRTTPATP AIQVDVSLGL LGFGSATVTV YGRVPGGQTT VPAGAYTQSF SGTAATVYAL ANPGSTTCSS ITSNPTTFSL STSATLVSDC LIGATNLDFG TAGLLTSALT ASSAITLNCT NQTPWTLALS AGSGSGATVS GRLLTRGGDT QTVGYNLYTS SAYTTAWGDG TGGSSNVAGT GTGLAQSTTV FGRVPAQTTP QAGTYTDTII VTVTY
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